| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4166 |
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| Symbol | |
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| ID | 6269020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3888306 |
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| End bp | 3889733 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641727990 |
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| Product | drug resistance MFS transporter, drug:H+ antiporter-1 (DHA2) family |
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| Protein accession | YP_001882411 |
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| Protein GI | 187731926 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00000209718 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATA AAAAGAAGCG TAGTATGGCG GGTTTGCCGT GGATCGCGGC GATGGCCTTC
TTCATGCAGG CACTTGATGC CACTATTCTG AATACCGCCT TACCCGCAAT CGCTCATAGC
CTTAATCGTT CTCCTCTCGC AATGCAATCA GCCATCATCA GTTATACGCT GACGGTGGCG
ATGTTTATTC CGGTAAGCGG ATGGCTAGCC GATCGCTTCG GTACGCGTCG CATTTTTACC
CTTGCCGTGA GTCTGTTCAC GTTGGGTTCT CTGGCCTGCG CACTTTCTAA TTCGCTACCA
CAGCTGGTTG TCTTCCGGGT TATTCAGGGG ATAGGCGGCG CAATGATGAT GCCTGTTGCT
CGGCTGGCCT TACTGCGTGC TTATCCTCGT AATGAACTTC TTCCTGTATT GAATTTTGTC
GCCATGCCGG GTCTGGTGGG GCCAATTTTA GGCCCCGTTC TTGGCGGCGT GCTGGTCACC
TGGGCAACCT GGCACTGGAT ATTTTTAATC AATATCCCCA TAGGTATTGC GGGCCTTCTT
TACGCGCGCA AACATATGCC CAATTTCACC ACCGCACGAC GCAGATTCGA TATCACTGGC
TTTTTGCTGT TTGGCCTCAG CCTTGTTCTC TTCTCAAGCG GAATAGAGCT ATTCGGGGAA
AAGATTGTCG CCAGCTGGAT TGCCTTGACG GTAATTGTCA CCAGCATCGG GTTACTGCTT
CTCTATATTC TCCATGCGCG ACACACGCCA AACCCATTAA TTTCATTAGA TTTATTTAAA
ACCCGCACTT TCTCGATCGG TATCGTAGGC AATATTGCAA CCCGTCTGGG GACCGGTAGT
GTACCGTTCC TTATGCCATT GATGTTACAG GTAGGATTTG GTTATCAGGC GTTTATTGCC
GGCTGTATGA TGGCACCGAC AGCGTTAGGT TCCATTATTG CAAAATCGAT GGTTACCCAA
GTCTTACGTC GTCTGGGCTA TCGCCATACG TTAGTGGGGA TCACGGTGAT TATTGGGCTA
ATGATCGCTC AGTTCTCTTT GCAATCACCG GCAATGGCGA TATGGATGCT GATCTTGCCG
TTGTTTATAT TAGGGATGGC TATGTCGACG CAATTTACCG CGATGAATAC CATCACACTT
GCCGATCTGA CCGATGACAA CGCCAGCAGC GGTAACAGTG TTCTGGCGGT CACGCAGCAA
CTGTCGATTA GTTTAGGCGT TGCTGTAAGT GCGGCCGTCC TTCGCGTTTA TAAAGGGATG
GAAGGCACAA CGACTGTCGA ACAATTCCAC TATACGTTTA TCACGATGGG CATTATTACT
GTTGCTTCAG CAGCAATGTT CATGCTTCTG AAAACAACCG ATGGTAATAA TTTGATCAAA
AGACAGCGTA AATCTAAGCC GAACCGCGTT CCATCAGAAT CGGAGTAA
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| Protein sequence | MSDKKKRSMA GLPWIAAMAF FMQALDATIL NTALPAIAHS LNRSPLAMQS AIISYTLTVA
MFIPVSGWLA DRFGTRRIFT LAVSLFTLGS LACALSNSLP QLVVFRVIQG IGGAMMMPVA
RLALLRAYPR NELLPVLNFV AMPGLVGPIL GPVLGGVLVT WATWHWIFLI NIPIGIAGLL
YARKHMPNFT TARRRFDITG FLLFGLSLVL FSSGIELFGE KIVASWIALT VIVTSIGLLL
LYILHARHTP NPLISLDLFK TRTFSIGIVG NIATRLGTGS VPFLMPLMLQ VGFGYQAFIA
GCMMAPTALG SIIAKSMVTQ VLRRLGYRHT LVGITVIIGL MIAQFSLQSP AMAIWMLILP
LFILGMAMST QFTAMNTITL ADLTDDNASS GNSVLAVTQQ LSISLGVAVS AAVLRVYKGM
EGTTTVEQFH YTFITMGIIT VASAAMFMLL KTTDGNNLIK RQRKSKPNRV PSESE
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