Gene SbBS512_E4149 details

Gene Information

• Locus tag: SbBS512_E4149
• Symbol: ilvD
• ID: 6271981
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 3873591
• End bp: 3875441
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641727976
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_001882403
• Protein GI: 187732909
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTAAGT ACCGTTCCGC CACCACCACT CATGGTCGTA ATATGGCGGG TGCTCGTGCG 
CTGTGGCGCG CCACCGGAAT GACCGACGCC GATTTTGGCA AGCCGATTAT CGCGGTTGTG 
AACTCGTTCA CCCAATTTGT ACCGGGTCAC GTCCATCTGC GCGATCTCGG TAAACTGGTC 
GCCGAACAAA TTGAAGCGGC TGGCGGCGTT GCCAAAGAGT TCAACACCAT TGCGGTGGAT 
GATGGGATTG CCATGGGCCA CGGGGGGATG CTTTATTCAC TTCCATCTCG CGAACTGATC 
GCTGATTCCG TTGAGTATAT GGTCAACGCC CACTGCGCCG ACGCCATGGT CTGCATCTCT 
AACTGCGACA AAATCACCCC GGGGATGCTG ATGGCTTCCC TGCGCCTGAA TATTCCGGTG 
ATCTTTGTTT CCGGCGGCCC GATGGAGGCC GGGAAAACCA AACTGTCCGA TCAGATAATC 
AAACTCGATC TGGTTGATGC GATGATCCAG GGCGCAGACC CGAAAGTTTC TGACTCCCAG 
AGCGATCAGG TTGAACGTTC CGCCTGCCCA ACCTGCGGTT CCTGCTCCGG GATGTTTACC 
GCTAACTCAA TGAACTGCCT GACCGAAGCG CTGGGTTTGT CGCAGCCAGG CAACGGCTCG 
CTGCTGGCAA CCCACGCGGA CCGTAAGCAG CTGTTCCTTA ATGCTGGTAA ACGCATTGTT 
GAATTGACCA AACGTTATTA CGAGCAAAAC GACGAAAGTG CACTGCCGCG TAATATCGCC 
AGTAAGGCGG CGTTTGAAAA CGCCATGACG CTGGATATCG CGATGGGTGG ATCGACTAAC 
ACCGTACTTC ACCTGCTGGC GGCGGCGCAG GAAGCGGAAA TCGACTTCAC CATGAGTGAT 
ATCGATAAGC TTTCCCGCAA GGTTCCACAG CTGTGTAAAG TTGCGCCGAG CACCCAGAAA 
TACCATATGG AAGATGTTCA CCGTGCTGGT GGTGTTATCG GTATTCTCGG CGAACTGGAT 
CGCGCGGGGT TACTGAACCG TGATGTGAAA AACGTGCTCG GCCTGACGTT GCCGCAAACG 
CTGGAGCAAT ACGACGTTAT GCTGACCCAG GATGACGCGG TAAAAAATAT GTTCCGCGCC 
GGCCCTGCGG GTATCCGTAC CACCCAGGCA TTCTCGCAAG ATTGCCGTTG GGATACGCTG 
GACGACGATC GCGCAAACGG CTGTATCCGC TCGCTGGAAC ACGCCTACAG CAAAGACGGC 
GGCCTGGCGG TGCTCTACGG TAATTTTGCT GAAAACGGCT GCATCGTGAA AACCGCGGGC 
GTCGATGACA GCATCCTCAA ATTCACCGGC CCGGCAAAAG TGTACGAAAG CCAGGACGAC 
GCGGTAGAAG CGATCCTCGG TGGCAAAGTT GTCGCGGGCG ATGTGGTGGT GATCCGCTAT 
GAAGGCCCGA AAGGCGGCCC TGGCATGCAG GAAATGCTCT ACCCAACCAG CTTCCTGAAA 
TCAATGGGTC TCGGTAAAGC CTGTGCGCTG ATCACCGACG GTCGTTTCTC TGGCGGCACC 
TCTGGTCTTT CCATCGGCCA CGTCTCACCG GAAGCGGCAA GCGGCGGCAG CATTGGTCTG 
ATTGAAGATG GTGACCTGAT CGCTATCGAC ATCCCGAACC GTGGCATTCA GTTACAGGTA 
AGCGATGCCG AACTGGCGGC GCGTCGTGAA GCGCAGGAAG CTCGGGGTGA CAAAGCCTGG 
ACGCCGAAAA ACCGTGAACG TCAGGTTTCC TTTGCCCTGC GCGCCTACGC CAGCCTGGCA 
ACCAGCGCCG ACAAAGGTGC GGTGCGCGAT AAATCGAAAC TGGGGGGTTA A 

 

Protein sequence

MPKYRSATTT HGRNMAGARA LWRATGMTDA DFGKPIIAVV NSFTQFVPGH VHLRDLGKLV 
AEQIEAAGGV AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADAMVCIS 
NCDKITPGML MASLRLNIPV IFVSGGPMEA GKTKLSDQII KLDLVDAMIQ GADPKVSDSQ 
SDQVERSACP TCGSCSGMFT ANSMNCLTEA LGLSQPGNGS LLATHADRKQ LFLNAGKRIV 
ELTKRYYEQN DESALPRNIA SKAAFENAMT LDIAMGGSTN TVLHLLAAAQ EAEIDFTMSD 
IDKLSRKVPQ LCKVAPSTQK YHMEDVHRAG GVIGILGELD RAGLLNRDVK NVLGLTLPQT 
LEQYDVMLTQ DDAVKNMFRA GPAGIRTTQA FSQDCRWDTL DDDRANGCIR SLEHAYSKDG 
GLAVLYGNFA ENGCIVKTAG VDDSILKFTG PAKVYESQDD AVEAILGGKV VAGDVVVIRY 
EGPKGGPGMQ EMLYPTSFLK SMGLGKACAL ITDGRFSGGT SGLSIGHVSP EAASGGSIGL 
IEDGDLIAID IPNRGIQLQV SDAELAARRE AQEARGDKAW TPKNRERQVS FALRAYASLA 
TSADKGAVRD KSKLGG