| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4115 |
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| Symbol | |
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| ID | 6271560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3840252 |
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| End bp | 3841151 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641727944 |
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| Product | carboxylate/amino acid/amine transporter |
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| Protein accession | YP_001882375 |
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| Protein GI | 187731552 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | [TIGR00950] Carboxylate/Amino Acid/Amine Transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.210953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTCCA CCAGAAAGGG GATGCTGAAC GTTCTGATTG CCGCCGTGTT GTGGGGAAGT
TCAGGGGTCT GCGCGCAATA CATCATGGAG CAAAGCCAGA TGTCGTCGCA GTTTTTGACT
ATGACGCGTT TGATATTCGC CGGTTTGATT CTACTGACGC TGTCATTTGT TCATGGCGAT
AAAATCTTTT CTATTATTAA CAATCATAAA GATGCCATTA GCCTGCTGAT TTTTTCCGTG
GTTGGCGCGC TAACTGTACA GCTCACTTTT TTGCTAACCA TCGAAAAATC GAACGCAGCC
ACGGCAACGG TGCTGCAATT CCTCTCACCG ACGATTATCG TCGCCTGGTT CTCACTGGTG
CGTAAATCGC GCCCGGGCAT TCTGGTTTTC TGCGCTATTT TGACATCGCT GGTCGGGACT
TTTTTATTGG TGACACACGG TAATCCGACG TCATTATCGC TCTCTCCTGC CGCGTTGTTC
TGGGGCATTG CCTCGGCATT TGCTGCTGCA TTCTATACCA CCTATCCCTC AACGCTAATT
GCCCGCTATG GCACGTTACC AGTCGTCGGC TGGAGTATGC TGATTGGCGG TCTGATTCTG
TTGCCTTTTT ATGCCAGACA AGGAACAAAC TTTGTCGTTA ACGGCAGTTT GATTCTGGCG
TTTTTTTATT TGGTGGTCAT TGGTACGTCC CTGACATTTA GTCTGTACCT GAAAGGAGCA
CAATTAATTG GCGGTCCAAA AGCCAGCATT TTGAGCTGTG CAGAACCATT AAGTAGCGCG
CTACTCTCTT TGCTGTTGCT GGGGATCACG TTCACATTAC CGGACTGGCT GGGAACGCTG
CTGATTCTGT CATCGGTGAT TTTGATTTCA ATGGATTCCC GTCGCCGGCC AGAAAAATAA
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| Protein sequence | MGSTRKGMLN VLIAAVLWGS SGVCAQYIME QSQMSSQFLT MTRLIFAGLI LLTLSFVHGD
KIFSIINNHK DAISLLIFSV VGALTVQLTF LLTIEKSNAA TATVLQFLSP TIIVAWFSLV
RKSRPGILVF CAILTSLVGT FLLVTHGNPT SLSLSPAALF WGIASAFAAA FYTTYPSTLI
ARYGTLPVVG WSMLIGGLIL LPFYARQGTN FVVNGSLILA FFYLVVIGTS LTFSLYLKGA
QLIGGPKASI LSCAEPLSSA LLSLLLLGIT FTLPDWLGTL LILSSVILIS MDSRRRPEK
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