Gene SbBS512_E4102 details

Gene Information

• Locus tag: SbBS512_E4102
• Symbol: trmH
• ID: 6269540
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3824870
• End bp: 3825559
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641727932
• Product: tRNA guanosine-2'-O-methyltransferase
• Protein accession: YP_001882364
• Protein GI: 187732340
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0566] rRNA methylases

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCCAA CACGTTATGC ACGCATCTGC GAAATGCTCG CCAGGCGGCA GCCTGATCTG 
ACCGTCTGCA TGGAGCAGGT CCACAAACCT CATAACGTTT CTGCGATTAT TCGTACCGCA 
GATGCCGTTG GCGTACATGA AGTTCACGCC GTCTGGCCTG GTAGCCGCAT GCGCACCATG 
GCTTCGGCAG CGGCGGGTAG TAACAGCTGG GTACAGGTGA AAACACACCG CACCATTGGC 
GATGCCGTCG CTCATCTCAA AGGCCAGGGC ATGCAGATTC TGGCAACCCA TCTTTCTGAT 
AACGCTGTCG ATTTCCGCGA AATTGATTAC ACTCGCCCGA CCTGCATTTT GATGGGACAG 
GAGAAAACGG GCATCACGCA GGAAGCATTG GCCCTGGCGG ATCAGGACAT CATCATTCCG 
ATGATCGGCA TGGTGCAGTC GCTGAATGTT TCCGTTGCCT CAGCCCTCAT TCTTTACGAA 
GCCCAGCGTC AGCGGCAAAA TGCAGGCATG TACCTGCGTG AAAACAGCAT GTTGCCGGAA 
GCAGAGCAAC AACACCTGTT GTTTGAAGGC GGCTATCCGG TGCTGGCGAA AGTCGCAAAA 
CGCAAAGGCC TGCCTTATCC CCACGTCAAT CAGCAAGGCG AGATCGAAGC TGATGCCGAC 
TGGTGGGCTA CTATGCAGGC TGCAGGGTAA 

 

Protein sequence

MNPTRYARIC EMLARRQPDL TVCMEQVHKP HNVSAIIRTA DAVGVHEVHA VWPGSRMRTM 
ASAAAGSNSW VQVKTHRTIG DAVAHLKGQG MQILATHLSD NAVDFREIDY TRPTCILMGQ 
EKTGITQEAL ALADQDIIIP MIGMVQSLNV SVASALILYE AQRQRQNAGM YLRENSMLPE 
AEQQHLLFEG GYPVLAKVAK RKGLPYPHVN QQGEIEADAD WWATMQAAG