| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4069 |
|---|
| Symbol | |
|---|
| ID | 6269508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 3799499 |
|---|
| End bp | 3800362 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641727909 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001882341 |
|---|
| Protein GI | 187733271 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1561] Uncharacterized stress-induced protein |
|---|
| TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.105197 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCA GTATGACCGC CTACGCCCGG CGTGAAATCA AGGGTGAATG GGGGAGCGCA
ACCTGGGAAA TGCGCTCGGT AAACCAGCGT TATCTGGAAA CTTACTTTCG TCTGCCGGAG
CAGTTCCGTA GCCTTGAACC TGTCGTTCGC GAGCGTATTC GTTCTCGCCT GACGCGCGGT
AAAGTGGAAT GTACCCTGCG CTATGAGCCA GATATTAGCG CGCAAGGTGA GCTGATCCTC
AACGAAAAAC TGGCTAAACA GCTGGTAACT GCCGCGAACT GGGTAAAAAT GCAGAGTGAC
GAAGGGGAAA TCAACCCGGT TGATATTCTA CGCTGGCCGG GCGTGATGGC AGCCCAGGAG
CAGGATCTTG ACGCCATTGC CGCTGAAATT CTCGCGGCGC TGGATGGTAC GCTGGACGAC
TTTATTGTCG CGCGCGAAAC CGAAGGTCAG GCACTGAAAG CATTGATCGA GCAGCGTCTG
GAAGGCGTCA CCGCCGAAGT GGTCAAAGTC CGCGCCCATA TGCCGGAAAT CCTGCAATGG
CAGCGTGAGC GTCTGGTCGC GAAGCTGGAA GATGCTCAGG TTCAGTTGGA AAACAACCGT
CTGGAGCAGG AGCTGGTTCT GCTGGCACAA CGAATTGACG TTGCCGAAGA ACTGGACCGC
CTGGAAGCGC ATGTCAAAGA GACCTACAAC ATTCTGAAGA AAAAAGAAGC CGTTGGTCGT
CGTCTGGACT TTATGATGCA GGAATTCAAC CGCGAGTCGA ACACTCTTGC GTCGAAGTCT
ATCAATGCCG AAGTGACAAA CTCCGCGATT GAGCTGAAAG TGTTGATTGA GCAGATGCGC
GAGCAGATTC AGAATATCGA GTAA
|
|---|
| Protein sequence | MIRSMTAYAR REIKGEWGSA TWEMRSVNQR YLETYFRLPE QFRSLEPVVR ERIRSRLTRG
KVECTLRYEP DISAQGELIL NEKLAKQLVT AANWVKMQSD EGEINPVDIL RWPGVMAAQE
QDLDAIAAEI LAALDGTLDD FIVARETEGQ ALKALIEQRL EGVTAEVVKV RAHMPEILQW
QRERLVAKLE DAQVQLENNR LEQELVLLAQ RIDVAEELDR LEAHVKETYN ILKKKEAVGR
RLDFMMQEFN RESNTLASKS INAEVTNSAI ELKVLIEQMR EQIQNIE
|
|---|
| |