| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4068 |
|---|
| Symbol | rph |
|---|
| ID | 6270414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 3798656 |
|---|
| End bp | 3799372 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641727908 |
|---|
| Product | ribonuclease PH |
|---|
| Protein accession | YP_001882340 |
|---|
| Protein GI | 187733771 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0689] RNase PH |
|---|
| TIGRFAM ID | [TIGR01966] ribonuclease PH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.010474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCAG CAGGCCGTAG CAATAATCAG GTGCGTCCCG TTACCCTGAC TCGTAACTAT
ACAAAACATG CAGAAGGCTC GGTGCTGGTC GAATTTGGCG ATACCAAAGT GTTGTGTACC
GCCTCTATTG AAGAAGGCGT GCCGCGCTTC CTGAAAGGTC AGGGCCAGGG CTGGATCACC
GCAGAGTACG GCATGCTGCC ACGTTCTACC CACACCCGTA ACGCTCGTGA AGCGGCGAAA
GGTAAGCAGG GTGGACGCAC AATGGAAATC CAGCGTCTGA TCGCCCGTGC TCTTCGCGCG
GCAGTAGATT TGAAAGCGCT GGGTGAGTTC ACCATTACGC TGGACTGCGA CGTGCTTCAG
GCTGATGGTG GCACGCGTAC CGCGTCGATT ACGGGTGCCT GCGTGGCGCT GGCAGATGCG
CTACAGAAGC TGGTGGAAAA CGGCAAGCTG AAAACCAACC CGATGAAAGG GATGGTAGCC
GCAGTTTCTG TCGGAATTGT GAACGGCGAA GCGGTTTGCG ATCTGGAATA CGTTGAAGAC
TCTGCCGCAG AGACCGACAT GAACGTAGTG ATGACCGAAG ACGGGCGCAT CATTGAAGTG
CAGGGGACGG CAGAAGGCGA GCCGTTCACC CATGAAGAGC TACTCACCTT GTTGGCTCTG
GCCCGAGGGG GAATCGAATC CATTGTAGCG ACGCAGAAGG CGGCGCTGGC AAACTGA
|
|---|
| Protein sequence | MRPAGRSNNQ VRPVTLTRNY TKHAEGSVLV EFGDTKVLCT ASIEEGVPRF LKGQGQGWIT
AEYGMLPRST HTRNAREAAK GKQGGRTMEI QRLIARALRA AVDLKALGEF TITLDCDVLQ
ADGGTRTASI TGACVALADA LQKLVENGKL KTNPMKGMVA AVSVGIVNGE AVCDLEYVED
SAAETDMNVV MTEDGRIIEV QGTAEGEPFT HEELLTLLAL ARGGIESIVA TQKAALAN
|
|---|
| |