Gene SbBS512_E4066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4066 
SymbolslmA 
ID6268842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp3797316 
End bp3797912 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content53% 
IMG OID641727906 
Productnucleoid occlusion protein 
Protein accessionYP_001882338 
Protein GI187731015 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00270158 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAA AACAAACTGC GAAAAGGAAC CGTCGCGAGG AAATACTTCA GTCTCTGGCG 
CTGATGCTGG AATCCAGCGA TGGAAGCCAA CGTATCACGA CGGCAAAACT GGCCGCCTCT 
GTCGGCGTTT CCGAAGCGGC ACTGTATCGC CACTTCCCCA GTAAGACCCG CATGTTCGAT 
AGCCTGATTG AGTTTATCGA AGATAGCCTG ATTACTCGCA TCAACCTGAT TCTGAAAGAT 
GAGAAAGACA CCACAGCGCG CCTGCGTCTG ATTGTGTTGC TGCTTCTCGG TTTTGGTGAG 
CGTAATCCTG GCCTGACCCG CATCCTCACT GGTCATGCGC TAATGTTTGA ACAGGATCGC 
CTGCAAGGGC GCATCAACCA GCTGTTCGAG CGTATTGAAG CGCAGCTGCG TCAGGTATTG 
CGTGAAAAGA GAATGCGTGA GGGTGAAGGT TACACCACCG ATGAAACCCT GCTGGCAAGC 
CAGATCCTGG CCTTCTGTGA AGGTATGCTG TCACGTTTTG TCCGCAGCGA ATTTAAATAC 
CGCCCGACGG ATGATTTTGA CGCCCGCTGG CCGCTAATTG CGGCACAGTT GCAGTAA
 
Protein sequence
MAEKQTAKRN RREEILQSLA LMLESSDGSQ RITTAKLAAS VGVSEAALYR HFPSKTRMFD 
SLIEFIEDSL ITRINLILKD EKDTTARLRL IVLLLLGFGE RNPGLTRILT GHALMFEQDR 
LQGRINQLFE RIEAQLRQVL REKRMREGEG YTTDETLLAS QILAFCEGML SRFVRSEFKY 
RPTDDFDARW PLIAAQLQ