Gene SbBS512_E4030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4030 
Symbol 
ID6272583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3763656 
End bp3764432 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content54% 
IMG OID641727870 
ProductDNA-binding transcriptional repressor LldR 
Protein accessionYP_001882302 
Protein GI187734175 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGTTT TACCCAGACG CCTGTCAGAC GAGGTTGCCG ATCGTGTGCG GGCGCTGATT 
GATGAAAAAA ACCTGGAAGC GGGCATGAAG TTGCCCGCTG AGCGCCAACT GGCGATGCAA
CTCGGCGTAT CACGTAATTC ACTACGCGAG GCGCTGGCAA AACTAGTGAG CGAAGGCGTG
CTGCTCAGTC GACGCGGCGG CGGGACGTTT ATTCGCTGGC GTCATGACAC ATGGCCGGAG
CAAAACATCG TCCAGCCGCT AAAAACGCTG ATGGCCGATG ATCCGGATTA CAGTTTCGAT
ATTCTGGAAG CCCGCTACGC CATTGAAGCC AGCACCGCAT GGCATGCGGC AATGCGCGCC
ACACCTGGCG ACAAAGAAAA GATTCAGCTT TGCTTTGAAG CAACGCTAAG TGAAGACCCG
GATATCGCCT CACAAGCGGA CGTTCGTTTT CATCTGGCGA TTGCCGAAGC CTCACATAAC
ATCGTGCTGC TGCAAACCAT GCGCGGTTTC TTCGATGTCC TGCAATCCTC AGTGAAGCAT
AGCCGTCAGC GGATGTATCT GGTGCCACCG GTTTTTTCAC AACTGACCGA ACAACATCAG
GCTGTCATTG ACGCCATTTT TGCTGGTGAT GCCGACGGGG CGCGTAAAGC AATGATGGCG
CACCTTAGTT TTGTTCACAC CACCATGAAA CGATTCGATG AAGATCAGGC TCGCCACGCA
CGGATTACCC GCCTGCCCGG TGAGCATAAT GAGCATTCGA GGGAGAAAAA CGCATGA
 
Protein sequence
MIVLPRRLSD EVADRVRALI DEKNLEAGMK LPAERQLAMQ LGVSRNSLRE ALAKLVSEGV 
LLSRRGGGTF IRWRHDTWPE QNIVQPLKTL MADDPDYSFD ILEARYAIEA STAWHAAMRA
TPGDKEKIQL CFEATLSEDP DIASQADVRF HLAIAEASHN IVLLQTMRGF FDVLQSSVKH
SRQRMYLVPP VFSQLTEQHQ AVIDAIFAGD ADGARKAMMA HLSFVHTTMK RFDEDQARHA
RITRLPGEHN EHSREKNA