| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3974 |
|---|
| Symbol | |
|---|
| ID | 6268370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 3706190 |
|---|
| End bp | 3706849 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641727822 |
|---|
| Product | putative outer membrane lipoprotein |
|---|
| Protein accession | YP_001882255 |
|---|
| Protein GI | 187734257 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC GTGTTTATCT TATTGCCGCC GTAGTGAGTG GCGCTCTGGC GGTATCTGGC
TGCACAACTA ACCCTTACAC CGGCGAACGC GAAGCAGGCA AATCTGCTAT CGGCGCAGGT
CTGGACTCTC TCGTGGGCGC GGGTATTGGT GCGCTCTCTT CTTCGAAGAA AGATCGCGGT
AAAGGCGCGC TGATTGGCGC AGCAGCAGGC GCAGCTCTGG GCGGCGGCGT GGGTTATTAC
ATGGATGTGC AGGAAGCGAA GCTGCGTGAC AAAATGCGCG GCACAGGTGT TAGCGTAACC
CGCAGCGGGG ATAACATTAT CCTCAATATG CCGAACAATG TGACCTTCGA CAGCAGCAGC
GCGACCCTGA AACCGGCAGG CGCTAACACC CTGACCGGCG TGGCAATGGT GCTGAAAGAG
TATCCGAAAA CGGCGGTTAA CGTGATTGGT TATACCGACA GCACGGGGGG TCACGACCTG
AACATGCGTC TCTCCCAGCA GCGTGCGGAT TCTGTTGCCA GCGCGTTGAT CACCCAGGGC
GTGGACGCCA GCCGCATCCG TACTCAGGGC CTTGGCCCGG CTAACCCAAT CGCCAGCAAC
AGCACCGCAG AAGGTAAGGC GCAAAACCGC CGTGTAGAAA TTACCTTAAG CCCGCTGTAA
|
|---|
| Protein sequence | MKKRVYLIAA VVSGALAVSG CTTNPYTGER EAGKSAIGAG LDSLVGAGIG ALSSSKKDRG
KGALIGAAAG AALGGGVGYY MDVQEAKLRD KMRGTGVSVT RSGDNIILNM PNNVTFDSSS
ATLKPAGANT LTGVAMVLKE YPKTAVNVIG YTDSTGGHDL NMRLSQQRAD SVASALITQG
VDASRIRTQG LGPANPIASN STAEGKAQNR RVEITLSPL
|
|---|
| |