| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3892 |
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| Symbol | glgB |
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| ID | 6270044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3615689 |
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| End bp | 3617875 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641727747 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_001882181 |
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| Protein GI | 187733639 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATC GTATCGATAG AGACGTGATT AACGCGCTAA TTGCAGGCCA TTTTGCGGAT
CCTTTTTCCG TACTGGGAAT GCATAAAACC ACCGCGGGAC TGGAAGTCCG TGCCCTTTTA
CCCGACGCTA CCGATGTGTG GGTGATTGAA CCGAAAACCG GGCGCAAACT CGCAAAACTG
GAGTGTCTTG ACTCACGGGG ATTCTTTAGC GGTGTCATTC CGCGACGTAA GAATTTTTTC
CGCTATCAGT TGGCTGTTGT CTGGCATGGT CAGCAAAACC TGATTGATGA TCCTTACCGT
TTTGGCCCGC TAATCCAGGA AATGGATGCC TGGCTATTAT CTGAAGGTAC TCACCTGCGC
CCGTATGAAA CCTTAGGCGC GCATGCAGAT ACTATGGATG GCGTCACAGG TACGCGTTTC
TCTGTTTGGG CTCCAAACGC CCGTCGGGTC TCGGTGGTTG GGCAATTCAA CTACTGGGAC
GGTCGCCGTC ACCCGATGCG TCTGCGTAAA GAGAGCGGCA TTTGGGAACT GTTTATCCCT
GGGGCGCATA ACGGTCAGCT CTATAAATAC GAGATGATTG ATGCCAATGG CAACTTGCGT
CTGAAGTCCG ACCCTTATGC CTTCGAAGCG CAAATGCGCC CGGAAACCGC GTCTCTTATT
TGCGGGCTGC CGGAAAAGGT TGTACAGACT GAAGAGCGCA AAAAAGCGAA TCAGTTTGAT
GCGTCAATCT CTATTTATGA AGTTCACCTG GGCTCCTGGC GTCGCCACAC CGATAACAAT
TTCTGGTTGA GCTACCGCGA GCTGGCCGAT CAACTGGTGC CTTATGCTAA ATGGATGGGC
TTTACCCACC TCGAACTACT GCCCATTAAC GAGCATCCCT TCGATGGCAG TTGGGGTTAT
CAGCCAACCG GCCTGTATGC ACCAACCCGC CGTTTTGGTA CTCGCGACGA CTTCCGTTAT
TTCATTGATG CCGCACACGC AGCGGGTCTG AACGTGATTC TCGACTGGGT GCCAGGCCAC
TTCCCGACCG ATGACTTTGC GCTTGCCGAA TTTGATGGCA CGAACTTGTA TGAACACAGC
GATCCGCGCG AAGGCTATCA TCAGGACTGG AATACGCTGA TCTACAATTA TGGTCGCCGT
GAAGTCAGTA ACTTCCTCGT CGGTAACGCG CTTTACTGGA TTGAACGTTT TGGTATTGAT
GCGCTGCGCG TCGATGCGGT GGCGTCAATG ATTTATCGCG ACTACAGCCG TAAAGAGGGG
GAGTGGATCC CGAACGAATT TGGCGGGCGC GAGAATCTTG AAGCGATTGA ATTCTTGCGT
AATACCAACC GTATTCTTGG TGAGCAGGTT TCCGGTGCGG TGACAATGGC TGAGGAGTCT
ACCGATTTCC CTGGCGTTTC TCGTCCGCAG GATATGGGCG GTCTGGGCTT CTGGTACAAG
TGGAACCTCG GCTGGATGCA TGACACCCTG GACTACATGA AGCTCGACCC GGTTTATCGT
CAGTATCATC ACGATAAACT CACCTTCGGG ATTCTCTACA ACTACACTGA AAACTTCGTC
CTGCCGTTGT CGCATGATGA AGTGGTCCAC GGTAAAAAAT CGATTCTCGA CCGCATGCCG
GGCGACGCAT GGCAGAAATT CGCTAACCTG CGCGCCTACT ATGGCTGGAT GTGGGCATTC
CCGGGCAAGA AACTGCTGTT CATGGGGAAC GAATTTGCCC AGGGCCGTGA GTGGAACCAT
GACGCCAGCC TCGACTGGCA TCTGTTGGAA GGTGGCGATA ACTGGCACCA CGGTGTCCAG
CGTCTGGTGC GCGATCTGAA CCTCACCTAC CGCCACCATA AAGCAATGCA TGAACTGGAT
TTTGACCCGT ACGGCTTTGA ATGGCTGGTG GTGGATGACA AAGAACGCTC GGTGCTGATC
TTTGTGCGTC GCGATAAAGA GGGTAACGAA ATTATCGTTG CCAGTAACTT TACGCCGGTG
CCGCGTCATG ATTATCGCTT CGGCATTAAT CAGCCAGGCA AATGGCGTGA AATCCTCAAT
ACCGATTCCA TGCACTATCA CGGCAGTAAT GCAGGCAATG GCGGCACGGT ACACAGCGAT
GAGATTGCCA GCCACGGTCG TCAGCATTCA CTAAGCCTGA CACTACCACC GCTGGCCACT
ATCTGGCTGG TTCGGGAGGC AGAATGA
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| Protein sequence | MSDRIDRDVI NALIAGHFAD PFSVLGMHKT TAGLEVRALL PDATDVWVIE PKTGRKLAKL
ECLDSRGFFS GVIPRRKNFF RYQLAVVWHG QQNLIDDPYR FGPLIQEMDA WLLSEGTHLR
PYETLGAHAD TMDGVTGTRF SVWAPNARRV SVVGQFNYWD GRRHPMRLRK ESGIWELFIP
GAHNGQLYKY EMIDANGNLR LKSDPYAFEA QMRPETASLI CGLPEKVVQT EERKKANQFD
ASISIYEVHL GSWRRHTDNN FWLSYRELAD QLVPYAKWMG FTHLELLPIN EHPFDGSWGY
QPTGLYAPTR RFGTRDDFRY FIDAAHAAGL NVILDWVPGH FPTDDFALAE FDGTNLYEHS
DPREGYHQDW NTLIYNYGRR EVSNFLVGNA LYWIERFGID ALRVDAVASM IYRDYSRKEG
EWIPNEFGGR ENLEAIEFLR NTNRILGEQV SGAVTMAEES TDFPGVSRPQ DMGGLGFWYK
WNLGWMHDTL DYMKLDPVYR QYHHDKLTFG ILYNYTENFV LPLSHDEVVH GKKSILDRMP
GDAWQKFANL RAYYGWMWAF PGKKLLFMGN EFAQGREWNH DASLDWHLLE GGDNWHHGVQ
RLVRDLNLTY RHHKAMHELD FDPYGFEWLV VDDKERSVLI FVRRDKEGNE IIVASNFTPV
PRHDYRFGIN QPGKWREILN TDSMHYHGSN AGNGGTVHSD EIASHGRQHS LSLTLPPLAT
IWLVREAE
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