| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3875 |
|---|
| Symbol | ugpQ |
|---|
| ID | 6269911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 3599283 |
|---|
| End bp | 3600026 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641727730 |
|---|
| Product | cytoplasmic glycerophosphodiester phosphodiesterase |
|---|
| Protein accession | YP_001882165 |
|---|
| Protein GI | 187733141 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACT GGCCTTATCC CCGCATCGTC GCTCATCGTG GCGGCGGTAA GCTGGCCCCG
GAAAACACCC TGGCGGCAAT CGACGTCGGG GCAAAATACG GTCATAAGAT GATCGAATTT
GACGCGAAGT TATCGAAAGA TGGCGAGATC TTCCTGCTCC ATGACGACAA TCTCGAACGC
ACCAGCAACG GCTGGGGCGT CGCGGGTGAA CTGAACTGGC AGGATTTACT GCGCGTGGAT
GCGGGCAGTT GGTACAGCAA AGCGTTTAAA GGTGAGCCGC TGCCGTTGCT TTCGCAGGTG
GCGGAACGCT GTCGCGAACA CGGGATGATG GCGAATATCG AAATCAAACC CACCACTGGC
ACTGGACCAT TAACGGGCAA AATGGTGGCG CTGGCGGCAC GCCAACTGTG GGCCGGTATG
ACGCCGCCGC TGCTGTCATC GTTTGAGATT GATGCTTTAG AAGCTGCACA GCTGGCGGCA
CCGGAACTGC CGCGTGGTTT ATTGCTTGAT GAGTGGCGCG ACGACTGGCG CGAACTGACC
GCGCGGCTGG GCTGCGTCTC TATTCATCTC AATCATAAGT TACTCGATAA AGCGCGAGTG
ATGCAGTTGA AAGACGCCGG ATTACGGATT CTGGTTTATA CCGTCAATAA ACCCCAGCGC
GCGGCAGAGT TGCTGCGCTG GGGCGTGGAT TGCATCTGTA CCGATGCGAT TGACGTGATT
GGTCCGAACT TTACGGCCCA ATAG
|
|---|
| Protein sequence | MSNWPYPRIV AHRGGGKLAP ENTLAAIDVG AKYGHKMIEF DAKLSKDGEI FLLHDDNLER
TSNGWGVAGE LNWQDLLRVD AGSWYSKAFK GEPLPLLSQV AERCREHGMM ANIEIKPTTG
TGPLTGKMVA LAARQLWAGM TPPLLSSFEI DALEAAQLAA PELPRGLLLD EWRDDWRELT
ARLGCVSIHL NHKLLDKARV MQLKDAGLRI LVYTVNKPQR AAELLRWGVD CICTDAIDVI
GPNFTAQ
|
|---|
| |