Gene SbBS512_E3851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3851 
Symbol 
ID6269969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp3577505 
End bp3578170 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content52% 
IMG OID641727707 
Producthypothetical protein 
Protein accessionYP_001882142 
Protein GI187733699 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTTT TCTCGCAAAC TCAACGCTAT AAGGCGTTGT TCTGGTTATC GTTATTTCAT 
CTGCTGGTGA TCACCTCCAG TAACTATCTG GTTCAGCTTC CCGTCTCCAT TTTGGGTTTC 
CATACCACCT GGGGCGCGTT TAGCTTCCCG TTTATTTTCC TTGCTACCGA CCTGACCGTG 
CGTATTTTTG GCGCACCGCT GGCCCGTCGT ATCATCTTTG CGGTGATGAT CCCGGCGTTG 
CTGATCTCCT ACGTCATCTC GTCGCTATTC TATATGGGTT CCTGGCAGGG ATTCGGCGCA 
CTCGCCCACT TCAACCTGTT TGTCGCCCGT ATCGCCACCG CCAGTTTCAT GGCCTACGCG 
CTGGGACAGA TCCTCGACGT GCACGTTTTT AACCGCCTGC GTCAGAGTCG CCGCTGGTGG 
CTGGCACCGA CAGCGTCCAC ACTGTTCGGT AACGTCAGCG ACACGCTGGC CTTTTTCTTC 
ATTGCCTTCT GGCGTAGCCC GGATGCCTTT ATGGCTGAAC ACTGGATGGA AATCGCGCTG 
GTCGATTACT GTTTCAAAGT GTTAATCAGT ATCGTTTTCT TCCTGCCAAT GTATGGCGTA 
TTACTCAATA TGCTGTTGAA AAGACTGGCA GATAAATCCG AAATCAACGC TTTGCAGGCG 
AGTTAA
 
Protein sequence
MNVFSQTQRY KALFWLSLFH LLVITSSNYL VQLPVSILGF HTTWGAFSFP FIFLATDLTV 
RIFGAPLARR IIFAVMIPAL LISYVISSLF YMGSWQGFGA LAHFNLFVAR IATASFMAYA 
LGQILDVHVF NRLRQSRRWW LAPTASTLFG NVSDTLAFFF IAFWRSPDAF MAEHWMEIAL 
VDYCFKVLIS IVFFLPMYGV LLNMLLKRLA DKSEINALQA S