| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3844 |
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| Symbol | nikB |
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| ID | 6269203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 3569753 |
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| End bp | 3570697 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641727700 |
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| Product | nickel transporter permease NikB |
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| Protein accession | YP_001882135 |
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| Protein GI | 187732901 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | [TIGR02789] nickel ABC transporter, permease subunit NikB |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCGTT ACGTATTACG CCGCTTTCTG CTGCTGATCC CGATGGTGCT CGCCGCCTCG
GTGATCATTT TTCTGATGCT GCGCCTCGGT ACCGGCGACC CGGCGCTCGA TTATTTGCGT
CTGTCTAACC TGCCGCCGAC GCCGGAGATG CTGGCCTCTA CCCGCACCAT GCTCGGACTG
GATCAGCCGC TGTACGTCCA GTACGGCACC TGGTTGTGGA AGGCGCTGCA TCTTGACTTT
GGTATCTCAT TCGCCAGCCA ACGCCCGGTG CTGGACGATA TGCTGAACTT CCTGCCCGCC
ACGCTGGAAC TTGCAGGTGC GGCGCTGGTA TTAATTCTGC TCACTTCCGT ACCGCTCGGT
ATCTGGGCGG CGCGCCACCG CGATCGTTTG CCGGATTTCG CCGTGCGCTT TATCGCGTTT
CTTGGCGTGT CGATGCCCAA CTTCTGGCTG GCATTTTTGC TAGTGATGGC GTTTTCGGTG
TATCTGCAAT GGCTACCCGC GATGGGCTAC GGCGGCTGGC AGCACATCAT TTTGCCTGCG
GTTTCCATCG CCTTTATGTC GCTGGCGATT AACGCGCGAC TGCTGCGCGC CAGTATGCTG
GACGTCGCCG GTCAGCGTCA CGTCACCTGG GCGCGGCTAC GCGGCCTGAA TGACAAACAG
ACCGAACGCC GCCATATTCT GCGCAATGCC TCGCTGCCGA TGATCACCGC CGTGGGGATG
CACATTGGCG AATTGATTGG CGGGACGATG ATTATCGAAA ACATCTTTGC CTGGCCTGGC
GTCGGGCGCT ATGCGGTGTC GGCGATTTTT AACCGTGACT ATCCGGTGAT TCAGTGCTTT
ACGCTGATGA TGGTGGTGGT TTTTGTGGTC TGTAATTTGA TTGTCGATTT GCTCAACGCC
GCGCTGGACC CGCGCATTCG TCGTCATGAA GGAGCGCACG CGTGA
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| Protein sequence | MLRYVLRRFL LLIPMVLAAS VIIFLMLRLG TGDPALDYLR LSNLPPTPEM LASTRTMLGL
DQPLYVQYGT WLWKALHLDF GISFASQRPV LDDMLNFLPA TLELAGAALV LILLTSVPLG
IWAARHRDRL PDFAVRFIAF LGVSMPNFWL AFLLVMAFSV YLQWLPAMGY GGWQHIILPA
VSIAFMSLAI NARLLRASML DVAGQRHVTW ARLRGLNDKQ TERRHILRNA SLPMITAVGM
HIGELIGGTM IIENIFAWPG VGRYAVSAIF NRDYPVIQCF TLMMVVVFVV CNLIVDLLNA
ALDPRIRRHE GAHA
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