| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3826 |
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| Symbol | |
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| ID | 6270654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 3552786 |
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| End bp | 3554255 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641727684 |
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| Product | inner membrane transporter YhiP |
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| Protein accession | YP_001882119 |
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| Protein GI | 187733591 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAA CAACACCCAT GGGGATGCTG CAGCAACCTC GCCCATTTTT CATGATCTTT
TTTGTCGAGT TATGGGAGCG ATTCGGCTAC TACGGCGTGC AGGGCGTACT GGCGGTTTTC
TTCGTTAAAC AGCTTGGATT CTCGCAAGAG CAGGCTTTTG TCACTTTTGG TGCTTTTGCT
GCGCTGGTCT ATGGCCTCAT TTCCATTGGC GGCTATGTCG GCGACCACCT GCTGGGGACC
AAACGCACCA TTGTTCTCGG AGCACTTGTG CTGGCGATTG GCTACTTCAT GACCGGCATG
TCGCTACTTA AGCCTGACCT GATTTTCATC GCCCTGGGGA CTATCGCTGT CGGTAACGGC
CTGTTTAAAG CTAACCCAGC CAGCTTGCTT TCGAAGTGCT ATCCGCCGAA AGATCCGCGG
CTTGATGGCG CATTCACCCT GTTCTATATG TCGATCAATA TCGGCTCGTT GATAGCGTTA
TCGCTGGCCC CTGTGATCGC TGATAGATTC GGTTATTCAG TCACCTACAA CCTGTGCGGG
GCGGGGTTAA TTATCGCATT ACTGGTTTAC ATCGCCTGTC GTGGAATGGT GAAAGACATT
GGTTCTGAAC CCGACTTCAA GCCGATGAGC TTCAGCAAAC TGTTGTACGT ATTACTTGGC
AGCGTGGTGA TGATCTTCGT ATGTGCATGG CTGATGCACA ACGTAGAAGT CGCCAATCTG
GTGCTGATTG TTCTCTCCAT CGTCGTCACC ATCATCTTCT TTCGTCAGGC ATTCAAGCTG
GATAAAACCG GGCGCAATAA AATGTTTGTC GCCTTTGTCC TGATGCTCGA AGCGGTGGTG
TTTTACATTC TCTACGCCCA GATGCCAACA TCGCTGAACT TCTTTGCCAT CAACAACGTG
CATCATGAAA TTCTCGGTTT TTCCATCAAC CCGGTCAGCT TCCAGGCGCT TAACCCGTTC
TGGGTGGTAC TCGCCAGCCC AATACTGGCA GACATTTACA CGCATCTGGG TAACAAAGGC
AAAGACCTCT CGATGCCGAT GAAATTTACT CTCGGCATGT TTATGTGCTC ACTGGGCTTT
TTGACGGCGG CAGCTGCGGG AATGTGGTTT GCGGATGCAC AAGGGCTGAC ATCGCCATGG
TTTATCGTGC TGGTGTACTT ATTCCAGAGC TTAGGTGAAC TGTTTATTAG CGCCCTTGGC
CTGGCGATGA TTGCTGCCCT GGTGCCGCAG CATTTGATGG GCTTTATTCT CGGGATGTGG
TTCCTGACGC AGGCTGCCGC GTTCTTGCTG GGCGGCTATG TGGCAACATT TACCGCGGTG
CCGGACAACA TTACCGATCC GCTTGAGACG TTGCCCGTCT ATACCAACGT GTTTGGTAAG
ATTGGTCTGG TCACGCTGGG CGTTGCAGTA GTGATGCTGT TGATGGTGCC GTGGCTGAAA
CGCATGATTG CGACGCCGGA AAGCCATTAA
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| Protein sequence | MNTTTPMGML QQPRPFFMIF FVELWERFGY YGVQGVLAVF FVKQLGFSQE QAFVTFGAFA
ALVYGLISIG GYVGDHLLGT KRTIVLGALV LAIGYFMTGM SLLKPDLIFI ALGTIAVGNG
LFKANPASLL SKCYPPKDPR LDGAFTLFYM SINIGSLIAL SLAPVIADRF GYSVTYNLCG
AGLIIALLVY IACRGMVKDI GSEPDFKPMS FSKLLYVLLG SVVMIFVCAW LMHNVEVANL
VLIVLSIVVT IIFFRQAFKL DKTGRNKMFV AFVLMLEAVV FYILYAQMPT SLNFFAINNV
HHEILGFSIN PVSFQALNPF WVVLASPILA DIYTHLGNKG KDLSMPMKFT LGMFMCSLGF
LTAAAAGMWF ADAQGLTSPW FIVLVYLFQS LGELFISALG LAMIAALVPQ HLMGFILGMW
FLTQAAAFLL GGYVATFTAV PDNITDPLET LPVYTNVFGK IGLVTLGVAV VMLLMVPWLK
RMIATPESH
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