Gene SbBS512_E3824 details

Gene Information

• Locus tag: SbBS512_E3824
• Symbol: prlC
• ID: 6272216
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3549935
• End bp: 3551977
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641727682
• Product: oligopeptidase A
• Protein accession: YP_001882117
• Protein GI: 187730439
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0339] Zn-dependent oligopeptidases

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAATC CGTTACTGAC TCCCTTTGAA TTGCCTCCGT TTTCTAAAAT TCTCCCGGAA 
CATGTCGTTC CAGCCGTGAC TCAGGCGCTG AACGATTGCC GCGAAAATGT GGAGCGCGTA 
GTAGCGCAAG GGGCACCGTA CACCTGGGAA AATCTCTGCC AGCCGTTGGC GGAAGTGGAC 
GATGTGTTGG GGCGTATCTT CTCCCCGGTC AGCCACCTGA ACTCGGTGAA AAATAGCCCG 
GAACTGCGTG AAGCCTACGA GCAAACCCTG CCGCTGCTGT CGGAATACAG CACCTGGGTA 
GGGCAACATG AAGGGCTGTA TAAAGCGTAC CGCGACCTGC GCGATGGCGA TCATTACGCC 
ACGCTGAACA CGGCGCAGAA GAAAGCGGTT GATAACGCCC TGCGTGATTT TGAACTCTCT 
GGCATAGGTC TGCCGAAAGA GAAACAGCAG CGTTACGGCG AAATTGCGAC CCGTCTTTCT 
GAACTGGGCA ACCAGTACAG CAACAACGTC CTCGATGCGA CAATGGGCTG GACCAAACTC 
GTTACCGACG AAGCGGAGCT GGCGGGGATG CCTGAAAGCG CGCTGGCTGC GGCAAAAGCC 
CAGGCCGAAG CGAAAGAGCT GGAAGGCTAC CTGCTGACGC TGGATATCCC AAGCTACCTG 
CCGGTAATGA CCTACTGCGA CAACCAGGCC TTGCGTGAAG AGATGTATCG CGCTTACAGC 
ACCCGCGCCT CCGATCAAGG CCCGAACGCC GGTAAATGGG ATAACAGCAA GGTGATGGAA 
GAGATCCTCG CTCTGCGTCA CGAACTGGCG CAACTGCTGG GCTTTGAAAA CTACGCCTTT 
AAATCCCTTG CCACTAAAAT GGCAGAAAAC CCGCAGCAGG TGCTGGATTT CTTAACCGAT 
CTGGCAAAAC GCGCGCGTCC GCAAGGCGAA AAAGAGCTGG CACAACTGCG CGCCTTCGCC 
AAAGCGGAAT TTGGCGTCGA TGAGTTGCAG CCGTGGGATA TCGCGTACTA CAGCGAAAAA 
CAAAAACAGC ACCTCTACAG CATCAGTGAC GAACAGCTGC GTCCGTACTT CCCGGAAAAC 
AAAGCGGTTA ACGGCCTGTT TGAAGTGGTG AAACGTATTT ACGGCATCAC CGCTAAAGAG 
CGTAAAGATG TTGATGTCTG GCATCCGGAT GTACGTTTCT TCGAACTGTA TGACGAGAAC 
AACGAACTGC GCGGCAGCTT CTACCTCGAT CTGTATGCCC GTGAAAACAA GCGCGGCGGG 
GCGTGGATGG ATGACTGCGT AGGCCAGATG CGTAAAGCTG ACGGTTCTCT GCAAAAACCG 
GTCGCGTATT TGACTTGTAA CTTCAACCGC CCGGTAAATG GTAAACCGGC GCTGTTCACT 
CACGACGAAG TGATCACCCT GTTCCACGAG TTCGGTCACG GCCTGCACCA TATGCTGACC 
CGCATCGAAA CCGCTGGTGT TTCCGGTATC AGCGGTGTGC CGTGGGATGC GGTCGAACTG 
CCGAGTCAGT TTATGGAAAA CTGGTGCTGG GAGCCGGAGG CGCTGGCGTT TATCTCTGGT 
CACTATGAAA CCGGCGAACC GCTGCCGAAA GAGTTGCTGG ATAAAATGCT GGCGGCGAAG 
AACTACCAGG CGGCGCTGTT TATTCTGCGC CAGCTGGAGT TCGGCCTGTT CGATTTCCGC 
CTCCATGCCG AGTTCCGCCC GGATCAGGGT GCGAAAATCC TCGAAACTCT GGCAGAAATC 
AAGAAACTGG TTGCCGTAGT ACCGTCTCCA TCCTGGGGCC GTTTCCCGCA CGCTTTCAGC 
CATATTTTCG CCGGTGGTTA TGCCGCAGGT TACTACAGCT ACCTGTGGGC TGACGTACTG 
GCGGCAGATG CCTTCTCGCG CTTTGAGGAA GAGGGCATTT TCAACCGTGA AACCGGGCAG 
TCGTTCCTCG ACAACATTCT GAGCCGTGGC GGTTCAGAAG AGCCGATGGA TCTGTTCAAA 
CGCTTCCGTG GTCGTGAACC GCAGCTGGAT GCGATGCTGG AGCATTACGG CATTAAGGGC 
TGA 

 

Protein sequence

MTNPLLTPFE LPPFSKILPE HVVPAVTQAL NDCRENVERV VAQGAPYTWE NLCQPLAEVD 
DVLGRIFSPV SHLNSVKNSP ELREAYEQTL PLLSEYSTWV GQHEGLYKAY RDLRDGDHYA 
TLNTAQKKAV DNALRDFELS GIGLPKEKQQ RYGEIATRLS ELGNQYSNNV LDATMGWTKL 
VTDEAELAGM PESALAAAKA QAEAKELEGY LLTLDIPSYL PVMTYCDNQA LREEMYRAYS 
TRASDQGPNA GKWDNSKVME EILALRHELA QLLGFENYAF KSLATKMAEN PQQVLDFLTD 
LAKRARPQGE KELAQLRAFA KAEFGVDELQ PWDIAYYSEK QKQHLYSISD EQLRPYFPEN 
KAVNGLFEVV KRIYGITAKE RKDVDVWHPD VRFFELYDEN NELRGSFYLD LYARENKRGG 
AWMDDCVGQM RKADGSLQKP VAYLTCNFNR PVNGKPALFT HDEVITLFHE FGHGLHHMLT 
RIETAGVSGI SGVPWDAVEL PSQFMENWCW EPEALAFISG HYETGEPLPK ELLDKMLAAK 
NYQAALFILR QLEFGLFDFR LHAEFRPDQG AKILETLAEI KKLVAVVPSP SWGRFPHAFS 
HIFAGGYAAG YYSYLWADVL AADAFSRFEE EGIFNRETGQ SFLDNILSRG GSEEPMDLFK 
RFRGREPQLD AMLEHYGIKG