Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3806 |
Symbol | |
ID | 6271225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3536428 |
End bp | 3537258 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641727666 |
Product | intramembrane serine protease GlpG |
Protein accession | YP_001882101 |
Protein GI | 187733536 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGATGA TTACCTCTTT TGCTAACCCC CGCGTGGTGC AGGCGTTTGT TGATTACATG GCGACGCAGG GTGTTATCCT TACGATTCAA CAACATAACC AAAGCGATGT CTGGCTGGCG GATGAGTCCC AGGCCGAGCG CGTGCGGGCG GAGCTGGCGC GTTTTCTCGA AAACCCGGCA GATCCGCGTT ATCTGGCGGC CAGCTGGCAG GCGGGCCATA CCGGCAGTGG TCTGCATTAT CGCCGTTATC CTTTCTTTGC TGCCTTGCGT GAACGCGCAG GTCCGGTAAC CTGGGTGGTG ATGATCGCCT GCGTGGTGGT GTTTATCGCC ATGCAAATTC TCGGCGATCA GGAAGTGATG TTATGGCTGG CCTGGCCATT CGATCCAACA CTGAAATTTG AGTTCTGGCG TTACTTCACC CACGCGTTAA TGCACTTCTC GCTGATGCAT ATCCTCTTTA ACCTGCTCTG GTGGTGGTAT CTCGGCGGTG CGGTGGAAAA ACGCCTCGGT AGCGGTAAGC TAATTGTTAT TACTCTCATT AGCGCCCTGT TAAGCGGCTA TGTGCAGCAA AAATTCAGCG GGCCGTGGTT TGGCGGGCTT TCTGGCGTGG TGTATGCGCT GATGGGCTAC GTCTGGCTAC GTGGTGAGCG CGATCCGCAA AGTGGCATTT ACCTGCAACG TGGGTTAATT ATCTTTGCGC TGATCTGGAT TGTCGCCGGA TGGTTTGATT TGTTTGGGAT GTCGATGGCG AACGGAGCAC ACATCGCCGG GTTAGCCGTG GGTTTAGCGA TGGCTTTTGT TGATTCGCTC AATGCGCGAA AACGAAAATA A
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Protein sequence | MLMITSFANP RVVQAFVDYM ATQGVILTIQ QHNQSDVWLA DESQAERVRA ELARFLENPA DPRYLAASWQ AGHTGSGLHY RRYPFFAALR ERAGPVTWVV MIACVVVFIA MQILGDQEVM LWLAWPFDPT LKFEFWRYFT HALMHFSLMH ILFNLLWWWY LGGAVEKRLG SGKLIVITLI SALLSGYVQQ KFSGPWFGGL SGVVYALMGY VWLRGERDPQ SGIYLQRGLI IFALIWIVAG WFDLFGMSMA NGAHIAGLAV GLAMAFVDSL NARKRK
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