Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3761 |
Symbol | trpS |
ID | 6271327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3486893 |
End bp | 3487897 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641727624 |
Product | tryptophanyl-tRNA synthetase |
Protein accession | YP_001882059 |
Protein GI | 187734261 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.602445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAGC CCATCGTTTT TAGTGGCGCA CAGCCCTCAG GTGAATTGAC CATTGGTAAC TACATGGGTG CGCTGCGTCA GTGGGTAAAC ATGCAGGATG ACTACCATTG CATTTACTGT ATCGTTGACC AACACGCGAT CACCGTGCGC CAGGATGCAC AGAAGCTGCG TAAAGCGACG CTGGATACGC TGGCCTTGTA TCTGGCTTGT GGTATCGATC CTGAGAAAAG CACCATTTTT GTTCAGTCCC ACGTACCAGA ACATGCGCAG TTAGGCTGGG CACTGAACTG CTATACCTAC TTCGGCGAAC TGAGCCGCAT GACCCAGTTT AAAGATAAAT CTGCGCGTTA TGCCGAGAAC ATCAACGCTG GTCTGTTTGA CTATCCGGTG CTGATGGCTG CGGACATCCT GCTGTATCAA ACTAATCTGG TACCGGTGGG TGAAGACCAG AAACAGCACC TGGAACTGAG TCGCGATATC GCCCAGCGTT TCAACGCGCT GTATGGCGAG ATCTTTAAGG TGCCGGAGCC GTTTATTCCG AAATCTGGCG CGCGCGTAAT GTCGCTGCTG GAGCCGACCA AGAAGATGTC CAAGTCTGAC GATAACCGCA ATAACGTTAT CGGCCTGCTG GAAGATCCGA AATCGGTAGT GAAGAAAATC AAACGCGCGG TCACTGACTC CGACGAGCCG CCGGTAGTTC ACTACGATGT GCAGAACAAA GCGGGCGTTT CCAACCTGCT GGATATCCTT TCTGCGGTAA CGGGCCAGAG CATCCCAGAA CTGGAAAAAC AGTTCGAAGG CAAGATGTAT GGTCATCTGA AAGGTGAAGT GGCTGATGCC GTTTCCGGTA TGCTGACTGA ATTGCAGGAA CGCTATCACC GTTTCCGCAA CGATGAAGCC TTCCTGCAAC AGGTGATGAA AGACGGCGCA GAAAAAGCCA GTGTACACGC TTCCCGTACG CTGAAAGCGG TGTACGAAGC GATTGGTTTT GTGGCGAAGC CGTAA
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Protein sequence | MTKPIVFSGA QPSGELTIGN YMGALRQWVN MQDDYHCIYC IVDQHAITVR QDAQKLRKAT LDTLALYLAC GIDPEKSTIF VQSHVPEHAQ LGWALNCYTY FGELSRMTQF KDKSARYAEN INAGLFDYPV LMAADILLYQ TNLVPVGEDQ KQHLELSRDI AQRFNALYGE IFKVPEPFIP KSGARVMSLL EPTKKMSKSD DNRNNVIGLL EDPKSVVKKI KRAVTDSDEP PVVHYDVQNK AGVSNLLDIL SAVTGQSIPE LEKQFEGKMY GHLKGEVADA VSGMLTELQE RYHRFRNDEA FLQQVMKDGA EKASVHASRT LKAVYEAIGF VAKP
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