| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3741 |
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| Symbol | nirB |
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| ID | 6269977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3466126 |
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| End bp | 3468669 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641727605 |
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| Product | nitrite reductase [NAD(P)H], large subunit |
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| Protein accession | YP_001882040 |
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| Protein GI | 187733721 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAG TCAGACTCGC AATTATCGGT AACGGTATGG TCGGCCATCG CTTTATCGAA
GATCTTCTTG ATAAATCTGA TGCGGCCAAC TTTGATATTA CCGTTTTCTG TGAAGAACCG
CGCATCGCTT ATGACCGCGT ACACCTCTCG TCTTACTTCT CTCACCACAC CGCCGAAGAG
CTGTCGCTGG TGCGCGAAGG CTTCTACGAG AAACACGGCA TCAAAGTTCT GGTCGGCGAA
CGCGCTATCA CCATCAACCG TCAGGAGAAG GTGATTCACT CCAGCGCCGG ACGTACCGTT
TTTTATGACA AGCTGATCAT GGCAACCGGT TCCTACCCGT GGATCCCACC AATCAAAGGT
TCTGATACTC AGGACTGCTT TGTCTATCGC ACCATTGAAG ACCTCAACGC CATTGAATCC
TGCGCCCGTC GCAGCAAACG CGGTGCCGTT GTTGGTGGCG GCCTGTTAGG TCTGGAAGCC
GCTGGCGCGC TGAAAAACTT AGGTATTGAA ACCCACGTTA TCGAATTTGC CCCTATGCTG
ATGGCGGAAC AGCTTGATCA GATGGGTGGC GAGCAGCTGC GTCGCAAAAT CGAAAGTATG
GGCGTGCGCG TTCACACCAG CAAAAACACC CTTGAGATTG TGCAGGAAGG TGTCGAAGCA
CGTAAAACCA TGCGTTTTGC CGACGGCAGC GAACTGGAAG TCGACTTTAT CGTCTTCTCT
ACCGGTATCC GTCCGCGCGA TAAGCTGGCA ACCCAGTGTG GTCTGGACGT TGCTCCGCGT
GGGGGTATCG TCATTAATGA TTCCTGCCAA ACTTCCGATC CGGATATCTA CGCTATCGGT
GAATGCGCAA GCTGGAACAA CCGTGTATTT GGTCTGGTAG CACCTGGCTA CAAAATGGCG
CAGGTCGCCG TTGACCATAT TCTCGGTAGC GAAAACGCCT TTGAAGGTGC TGACCTTAGC
GCCAAGCTGA AACTGCTGGG CGTGGACGTA GGCGGTATTG GTGATGCTCA TGGTCGCACG
CCTGGCGCAC GTAGCTACGT TTACCTCGAC GAAAGCAAAG AGATCTACAA ACGCCTGATC
GTCAGCGAAG ACAACAAAAC CCTGCTCGGT GCGGTACTGG TGGGCGATAC CAGCGACTAC
GGTAACTTGC TGCAACTGGT GCTGAATGCT ATCGAGCTGC CGGAAAACCC GGATTCTCTG
ATTCTGCCGG CGCACTCGGG TAGCGGTAAG CCGTCTATCG GTGTTGATAA ACTGCCGGAC
AGCGCGCAAA TCTGCTCCTG CTTCGACGTC ACTAAAGGTG ATCTGATTGC TGCCATCAAC
AAAGGCTGCC ACACAGTTGC GGCGCTGAAA GCTGAAACCA AAGCGGGTAC TGGCTGCGGT
GGCTGTATCC CGCTGGTCAC TCAGGTACTG AACGCGGAAC TGGCGAAACA GGGCATCGAA
GTTAACAACA ACCTGTGCGA ACACTTTGCT TATTCGCGTC AGGAACTGTT CCATTTGATC
CGCGTTGAAG GCATTAAAAC CTTCGAAGAA CTGCTGGCGA AACACGGCAA AGGCTACGGT
TGTGAAGTTT GTAAACCGAC CGTCGGTTCG CTGCTGGCCT CCTGCTGGAA CGAATACATT
CTGAAGCCAG AACATACTCC GCTGCAAGAT TCTAACGACA ACTTCCTCGC TAACATCCAG
AAAGACGGGA CCTACTCGGT GATCCCGCGT TCTCCGGGCG GTGAAATCAC CCCGGAAGGG
CTGATGGCAG TGGGTCGTAT CGCGCGTGAA TTTAATCTCT ACACCAAAAT CACCGGTTCC
CAGCGCCTGG CGATGTTTGG CGCACAGAAA GACGATCTGC CAGAGATCTG GCGTCAGCTG
ATTGAAGCCG GCTTCGAAAC CGGTCATGCC TATGCGAAAG CACTGCGTAT GGCGAAAACC
TGCGTGGGTA GCACCTGGTG CCGCTACGGC GTTGGCGACA GCGTCGGCCT CGGCGTGGAA
CTGGAAAACC GCTACAAAGG CATCCGTACG CCGCACAAAA TGAAGTTCGG TGTCTCCGGC
TGTACCCGTG AATGTTCAGA AGCTCAGGGT AAAGACGTGG GTATTATCGC CACTGAAAAA
GGCTGGAACC TGTATGTTTG CGGCAACGGC GGCATGAAAC CGCGTCATGC GGATCTGCTG
GCAGCGGATA TCGATCGCGA AACGCTGATC AAATATCTCG ACCGCTTCAT GATGTTCTAC
ATCCGTACCG CCGACAAACT GACGCGTACC GCGCCGTGGT TAGAAAACCT CGAAGGCGGC
ATCGATTACC TGAAAGCGGT GATCATTGAC GACAAACTGG GGCTGAACGC TCATCTAGAA
GAAGAGATGG CGCGCCTGCG TGAAGCAGTA GTGTGTGAGT GGACTGAAAC GGTCAATACA
CCGTCCGCGC AGACTCGCTT CAAACACTTC ATCAACAGCG ACAAGCGTGA CCCGAACGTG
CAGATGGTGC CAGAGCGCGA ACAGCACCGT CCGGCAACGC CGTATGAACG TATCCCGGTA
ACTCTGGTGG AGGACAACGC ATGA
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| Protein sequence | MSKVRLAIIG NGMVGHRFIE DLLDKSDAAN FDITVFCEEP RIAYDRVHLS SYFSHHTAEE
LSLVREGFYE KHGIKVLVGE RAITINRQEK VIHSSAGRTV FYDKLIMATG SYPWIPPIKG
SDTQDCFVYR TIEDLNAIES CARRSKRGAV VGGGLLGLEA AGALKNLGIE THVIEFAPML
MAEQLDQMGG EQLRRKIESM GVRVHTSKNT LEIVQEGVEA RKTMRFADGS ELEVDFIVFS
TGIRPRDKLA TQCGLDVAPR GGIVINDSCQ TSDPDIYAIG ECASWNNRVF GLVAPGYKMA
QVAVDHILGS ENAFEGADLS AKLKLLGVDV GGIGDAHGRT PGARSYVYLD ESKEIYKRLI
VSEDNKTLLG AVLVGDTSDY GNLLQLVLNA IELPENPDSL ILPAHSGSGK PSIGVDKLPD
SAQICSCFDV TKGDLIAAIN KGCHTVAALK AETKAGTGCG GCIPLVTQVL NAELAKQGIE
VNNNLCEHFA YSRQELFHLI RVEGIKTFEE LLAKHGKGYG CEVCKPTVGS LLASCWNEYI
LKPEHTPLQD SNDNFLANIQ KDGTYSVIPR SPGGEITPEG LMAVGRIARE FNLYTKITGS
QRLAMFGAQK DDLPEIWRQL IEAGFETGHA YAKALRMAKT CVGSTWCRYG VGDSVGLGVE
LENRYKGIRT PHKMKFGVSG CTRECSEAQG KDVGIIATEK GWNLYVCGNG GMKPRHADLL
AADIDRETLI KYLDRFMMFY IRTADKLTRT APWLENLEGG IDYLKAVIID DKLGLNAHLE
EEMARLREAV VCEWTETVNT PSAQTRFKHF INSDKRDPNV QMVPEREQHR PATPYERIPV
TLVEDNA
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