Gene SbBS512_E3727 details

Gene Information

• Locus tag: SbBS512_E3727
• ID: 6271759
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3452068
• End bp: 3453981
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641727591
• Product: putative ABC transporter ATP-binding protein
• Protein accession: YP_001882026
• Protein GI: 187732037
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.577827
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGTTT TCTCCTCGTT ACAAATTCGT CGCGGCGTGC GCGTCCTGCT GGATAATGCC 
ACCGCCACCA TCAACCCTGG GCAGAAAGTC GGCCTGGTGG GTAAAAACGG CTGTGGTAAA 
TCTACCCTGC TGGCATTGCT GAAAAATGAA ATCAGCGCCG ACGGCGGCAG CTACACCTTT 
CCGGGAAGCT GGCAACTGGC GTGGGTGAAT CAGGAAACGC CGGCGTTATC GCAAGCGGCG 
CTGGAATATG TCATTGACGG CGACCGTGAA TATCGTCAAC TGGAAGCGCA GCTGCACGAC 
GCCAACGAAC GTAACGACGG GCACGCCATT GCGACCATTC ATGGCAAGCT GGATGCTATT 
GACGCATGGA GTATTCGCTC CCGTGCCGCC AGCCTGCTGC ACGGCCTCGG TTTCAGCAAT 
GAACAACTGG AGCGCCCGGT AAGTGATTTC TCCGGTGGCT GGCGTATGCG TCTTAACCTT 
GCCCAGGCGC TGATTTGCCG TTCAGACTTG CTGCTGCTCG ACGAACCGAC TAACCACCTC 
GATCTCGATG CCGTTATCTG GCTGGAAAAA TGGTTGAAGA GCTATCAAGG CACGCTGATC 
CTGATCTCTC ACGACCGCGA CTTCCTCGAT CCGATCGTTG ATAAAATTAT TCATATCGAA 
CAACAAAGCA TGTTCGAGTA CACCGGCAAC TACAGTTCGT TTGAAGTACA GCGCGCCACC 
CGTCTGGCGC AGCAACAAGC GATGTATGAA AGCCAGCAGG AACGCGTGGC ACATCTGCAA 
AGTTATATCG ACCGTTTCCG TGCCAAAGCC ACCAAAGCGA AGCAAGCCCA GAGCCGCATT 
AAGATGCTTG AGCGTATGGA GCTGATTGCC CCCGCGCACG TCGACAACCC GTTCCGCTTT 
AGCTTCCGCG CGCCGGAAAG CCTGCCAAAT CCGTTACTGA AGATGGAAAA AGTCAGCGCG 
GGCTATGGCG ATCGCATTAT TCTCGACTCG ATTAAACTGA ACCTGGTGCC CGGCTCGCGC 
ATTGGTCTGT TAGGCCGCAA CGGCGCGGGT AAATCGACAT TAATCAAACT GTTAGCCGGT 
GAACTTGCGC CAGTCAGCGG TGAAATTGGT CTGGCGAAAG GGATCAAGCT CGGCTACTTC 
GCCCAGCATC AACTTGAATA CCTGCGCGCC GACGAATCAC CTATTCAACA TCTGGCACGT 
TTAGCGCCGC AGGAGCTGGA ACAAAAACTG CGTGACTACC TCGGCGGCTT TGGTTTCCAG 
GGCGATAAAG TAACCGAAGA AACGCGCCGC TTCTCCGGTG GGGAAAAAGC CCGCCTGGTG 
CTGGCATTAA TTGTCTGGCA GCGTCCGAAT CTGCTGCTGC TCGACGAACC GACTAACCAC 
CTTGACCTCG ACATGCGTCA GGCACTCACC GAAGCATTAA TCGAGTTTGA AGGCGCGCTG 
GTTGTCGTTT CGCACGACCG TCATTTGCTG CGTTCCACCA CTGACGATCT CTACCTGGTT 
CACGATCGTA AAGTCGAACC GTTCGACGGC GATCTGGAAG ATTATCAACA GTGGTTGAGC 
GACGTACAAA AGCAGGAAAA CCAGACCGAC GAAGCGCCAA AAGAGAACGC GAACAGCGCC 
CAGGCACGTA AAGATCAGAA GCGTCGGGAA GCGGAGCTGC GTGCGCAAAC CCAGCCGCTG 
CGTAAAGAGA TTGCCCGTCT GGAAAAAGAG ATGGAGAAGC TGAACGCGCA ACTGGCGCAG 
GCGGAAGAGA AACTCGGCGA CAGCGAACTG TATGACCAGA GCCGTAAAGC GGAGTTGACC 
GCCTGCCTGC AACAGCAAGC CAGCGCCAAA TCCGGCCTGG AAGAGTGCGA AATGGCGTGG 
CTGGAAGCCC AGGAGCAGCT TGAGCAGATG CTGCTGGAAG GCCAAAGCAA CTGA 

 

Protein sequence

MIVFSSLQIR RGVRVLLDNA TATINPGQKV GLVGKNGCGK STLLALLKNE ISADGGSYTF 
PGSWQLAWVN QETPALSQAA LEYVIDGDRE YRQLEAQLHD ANERNDGHAI ATIHGKLDAI 
DAWSIRSRAA SLLHGLGFSN EQLERPVSDF SGGWRMRLNL AQALICRSDL LLLDEPTNHL 
DLDAVIWLEK WLKSYQGTLI LISHDRDFLD PIVDKIIHIE QQSMFEYTGN YSSFEVQRAT 
RLAQQQAMYE SQQERVAHLQ SYIDRFRAKA TKAKQAQSRI KMLERMELIA PAHVDNPFRF 
SFRAPESLPN PLLKMEKVSA GYGDRIILDS IKLNLVPGSR IGLLGRNGAG KSTLIKLLAG 
ELAPVSGEIG LAKGIKLGYF AQHQLEYLRA DESPIQHLAR LAPQELEQKL RDYLGGFGFQ 
GDKVTEETRR FSGGEKARLV LALIVWQRPN LLLLDEPTNH LDLDMRQALT EALIEFEGAL 
VVVSHDRHLL RSTTDDLYLV HDRKVEPFDG DLEDYQQWLS DVQKQENQTD EAPKENANSA 
QARKDQKRRE AELRAQTQPL RKEIARLEKE MEKLNAQLAQ AEEKLGDSEL YDQSRKAELT 
ACLQQQASAK SGLEECEMAW LEAQEQLEQM LLEGQSN