Gene SbBS512_E3690 details

Gene Information

• Locus tag: SbBS512_E3690
• Symbol: rplF
• ID: 6269400
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 3427610
• End bp: 3428143
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641727554
• Product: 50S ribosomal protein L6
• Protein accession: YP_001881989
• Protein GI: 187734172
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0000000000170909
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGTG TTGCTAAAGC ACCGGTCGTT GTTCCTGCCG GCGTTGACGT AAAAATCAAC 
GGTCAGGTTA TTACGATCAA AGGTAAAAAC GGCGAGCTGA CTCGTACTCT CAACGATGCT 
GTTGAAGTTA AACATGCAGA TAATACCCTG ACCTTCGGTC CGCGTGATGG TTACGCAGAC 
GGTTGGGCAC AGGCTGGTAC CGCGCGTGCC CTGCTGAACT CAATGGTTAT CGGTGTTACC 
GAAGGCTTCA CTAAGAAGCT GCAGCTGGTT GGTGTAGGTT ACCGTGCAGC GGTTAAAGGT 
AATGTGATTA ACCTGTCTCT GGGTTTCTCT CATCCTGTTG ACCATCAGCT GCCTGCGGGT 
ATCACTGCTG AATGTCCGAC TCAGACTGAA ATCGTGCTGA AAGGCGCTGA TAAGCAGGTG 
ATCGGCCAGG TTGCAGCGGA TCTGCGCGCC TACCGTCGTC CTGAGCCTTA TAAAGGCAAG 
GGTGTTCGTT ACGCCGACGA AGTCGTGCGT ACCAAAGAGG CTAAGAAGAA GTAA 

 

Protein sequence

MSRVAKAPVV VPAGVDVKIN GQVITIKGKN GELTRTLNDA VEVKHADNTL TFGPRDGYAD 
GWAQAGTARA LLNSMVIGVT EGFTKKLQLV GVGYRAAVKG NVINLSLGFS HPVDHQLPAG 
ITAECPTQTE IVLKGADKQV IGQVAADLRA YRRPEPYKGK GVRYADEVVR TKEAKKK