Gene SbBS512_E3677 details

Gene Information

• Locus tag: SbBS512_E3677
• Symbol: mscL
• ID: 6270015
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3420027
• End bp: 3420437
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641727541
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_001881976
• Protein GI: 187730371
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCATTA TTAAAGAATT TCGCGAATTT GCGATGCGCG GGAACGTGGT GGATTTGGCG 
GTGGGTGTCA TTATCGGTGC GGCATTCGGG AAGATTGTAT CTTCACTGGT TGCCGATATC 
ATCATGCCAC CTCTGGGCTT ATTAATTGGC GGGATCGACT TTAAACAGTT TGCTGTCACG 
CTACGCGATG CGCAGGGGGA TATCCCTGCT GTTGTGATGC ATTACGGTGT CTTCATTCAA 
AACGTCTTTG ATTTTCTGAT TGTGGCCTTT GCCATCTTTA TGGCGATTAA GCTAATCAAC 
AAACTGAATC GGAAAAAAGA AGAACCAGCT GCCGCACCTG CACCAACTAA AGAAGAAGTA 
TTACTGGCAG AAATTCGTGA TTTGCTGAAA GAGCAGAATA ACCGCTCTTA A 

 

Protein sequence

MSIIKEFREF AMRGNVVDLA VGVIIGAAFG KIVSSLVADI IMPPLGLLIG GIDFKQFAVT 
LRDAQGDIPA VVMHYGVFIQ NVFDFLIVAF AIFMAIKLIN KLNRKKEEPA AAPAPTKEEV 
LLAEIRDLLK EQNNRS