| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3602 |
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| Symbol | nusA |
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| ID | 6268862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3351835 |
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| End bp | 3353322 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641727471 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001881914 |
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| Protein GI | 187731710 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.761318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAG AAATTTTGGC TGTAGTTGAA GCCGTATCCA ATGAAAAGGC GCTACCTCGC
GAGAAGATTT TCGAAGCATT GGAAAGCGCG CTGGCGACAG CAACAAAGAA AAAATATGAA
CAAGAGATCG ACGTCCGCGT ACAGATCGAT CGCAAAAGCG GTGATTTTGA CACCTTCCGT
CGCTGGTTAG TTGTTGATGA AGTCACCCAG CCGACCAAGG AAATCACCCT TGAAGCCGCA
CGTTATGAAG ATGAAAGCCT GAACCTGGGC GATTACGTTG AAGATCAGAT TGAGTCTGTT
ACCTTTGACC GTATCACTAC CCAGACGGCA AAACAGGTTA TCGTGCAGAA AGTGCGTGAA
GCCGAACGTG CGATGGTGGT TGATCAGTTC CGTGAACACG AAGGTGAAAT CATCACCGGC
GTGGTGAAAA AAGTAAACCG CGACAACATC TCTCTGGAGC TGGGCAACAA TGCTGAAGCC
GTGATCCTGC GCGAAGATAT GCTGCCGCGT GAAAACTTCC GCCCTGGCGA CCGCGTTCGT
GGCGTGCTCT ATTCCGTTCG CCCGGAAGCG CGTGGCGCGC AACTGTTCGT CACTCGTTCC
AAGCCGGAAA TGCTGATCGA ACTGTTCCGT ATTGAAGTGC CAGAAATCGG CGAAGAAGTG
ATTGAAATTA AAGCAGCGGC TCGCGATCCG GGTTCTCGTG CGAAAATCGC GGTGAAAACC
AACGATAAAC GTATCGATCC GGTAGGTGCC TGTGTAGGTA TGCGTGGCGC GCGTGTTCAG
GCGGTTTCTA CTGAACTGGG CGGCGAGCGT ATCGATATCG TCCTGTGGGA TGATAACCCG
GCGCAGTTTG TGATTAACGC AATGGCACCG GCAGACGTTG CTTCTATCGT GGTGGATGAA
GATAAACACA CCATGGATAT CGCCGTTGAA GCCGGTAACC TGGCGCAGGC GATTGGCCGT
AACGGTCAGA ACGTGCGTCT GGCTTCGCAG CTGAGCGGTT GGGAACTCAA CGTGATGACC
GTTGACGACC TGCAGGCTAA GCATCAGGCG GAAGCGCACG CAGCGATCGA CACCTTCACC
AAATATCTCG ACATCGACGA AGACTTCGCG ACTGTTCTGG TAGAAGAAGG CTTCTCGACG
CTGGAAGAAC TGGCCTATGT GCCGATGAAA GAGCTGTTGG AAATCGAAGG CCTTGATGAG
CCGACCGTTG AAGCACTGCG CGAGCGTGCT AAAAATGCAC TGGCCACCAT TGCACAGGCC
CAGGAAGAAA GCCTCGGTGA TAACAAACCG GCTGACGATC TGCTGAACCT TGAAGGGATA
GATCGTGATT TGGCATTCAA ACTGGCCGCC CGTGGCGTTT GTACGCTGGA AGATCTCGCC
GAACAGGGCA TTGATGATCT GGCTGATATC GAAGGGGTGA CCGACGAAAA AGCCGGAGCA
CTGATTATGG CTGCCCGTAA TATTTGCTGG TTCGGTGACG AAGCGTAA
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| Protein sequence | MNKEILAVVE AVSNEKALPR EKIFEALESA LATATKKKYE QEIDVRVQID RKSGDFDTFR
RWLVVDEVTQ PTKEITLEAA RYEDESLNLG DYVEDQIESV TFDRITTQTA KQVIVQKVRE
AERAMVVDQF REHEGEIITG VVKKVNRDNI SLELGNNAEA VILREDMLPR ENFRPGDRVR
GVLYSVRPEA RGAQLFVTRS KPEMLIELFR IEVPEIGEEV IEIKAAARDP GSRAKIAVKT
NDKRIDPVGA CVGMRGARVQ AVSTELGGER IDIVLWDDNP AQFVINAMAP ADVASIVVDE
DKHTMDIAVE AGNLAQAIGR NGQNVRLASQ LSGWELNVMT VDDLQAKHQA EAHAAIDTFT
KYLDIDEDFA TVLVEEGFST LEELAYVPMK ELLEIEGLDE PTVEALRERA KNALATIAQA
QEESLGDNKP ADDLLNLEGI DRDLAFKLAA RGVCTLEDLA EQGIDDLADI EGVTDEKAGA
LIMAARNICW FGDEA
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