Gene SbBS512_E3589 details

Gene Information

• Locus tag: SbBS512_E3589
• Symbol: greA
• ID: 6270498
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3339869
• End bp: 3340345
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641727459
• Product: transcription elongation factor GreA
• Protein accession: YP_001881904
• Protein GI: 187733737
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000000000874781
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGCTA TTCCGATGAC CTTACGCGGC GCTGAAAAAT TACGCGAAGA GCTGGATTTT 
CTGAAATCTG TGCGCCGTCC TGAAATCATT GCTGCTATCG CGGAAGCGCG TGAGCATGGC 
GACCTGAAAG AAAACGCCGA ATACCACGCA GCTCGTGAAC AGCAGGGTTT CTGCGAAGGC 
CGTATTAAAG ACATCGAAGC CAAGCTGTCG AACGCGCAGG TGATTGATGT CACCAAAATG 
CCCAACAATG GGCGCGTTAT TTTTGGTGCT ACCGTAACGG TGCTGAATCT GGATTCTGAC 
GAAGAACAGA CTTATCGCAT CGTTGGCGAT GACGAAGCTG ACTTTAAACA AAACCTGATT 
TCTGTAAACT CGCCTATTGC TCGTGGCCTG ATCGGCAAAG AAGAAGATGA TGTTGTGGTC 
ATCAAAACGC CGGGCGGCGA AGTAGAATTT GAAGTAATTA AGGTGGAATA CCTGTAA 

 

Protein sequence

MQAIPMTLRG AEKLREELDF LKSVRRPEII AAIAEAREHG DLKENAEYHA AREQQGFCEG 
RIKDIEAKLS NAQVIDVTKM PNNGRVIFGA TVTVLNLDSD EEQTYRIVGD DEADFKQNLI 
SVNSPIARGL IGKEEDDVVV IKTPGGEVEF EVIKVEYL