Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3586 |
Symbol | |
ID | 6273057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3335995 |
End bp | 3336960 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641727456 |
Product | putative transporter |
Protein accession | YP_001881901 |
Protein GI | 187733323 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000000241 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAGC AGGCAGGCAT TGGCATTCTT TTGGCGCTCA CCACAGCAAT TTGCTGGGGG GCGTTGCCAA TCGCAATGAA GCAGGTGCTG GAGGTGATGG AACCTCCGAC AATCGTGTTT TACCGTTTCT TGATGGCGAG TATTGGCCTG GGTGCCATTC TTGCGGTGAA GAAGAGGTTG CCGCCATTAC GCGTGTTTCG TAAGCTACGC TGGTTGATTT TGTTGGCAGT GGCGACCGCC GGGCTGTTTG GGAACTTCAT CCTGTTCAGC TCATCCTTGC AATACCTGAG TCCGACCGCT TCGCAGGTGA TTGGGCAACT CTCGCCAGTT GGCATGATGG TTGCCAGCGT ATTTATCCTG AAAGAGAAAA TGCGCAGCAC TCAGGTTGTA GGGGCATTGA TGCTCCTGAG CGGCCTGGTG ATGTTTTTTA ACACCACTCT GGTCGAGATA TTTACAAAGC TCACTGATTA CACCTGGGGA GTCATCTTTG GGGTCGGTGC GGCGACGGTT TGGGTGAGTT ATGGCGTGGC GCAAAAGGTT TTATTGCGTC GGCTGGCCTC ACCGCAGATC CTGTTTTTGC TGTACACTTT ATGTACAATT GCGCTCTTCC CTCTGGCAAA GCCAGGAGTG ATAGCGCAGC TTAGCCACTG GCAGCTCGCA TGTTTAATTT TTTGCGGACT GAATACATTG GTAGGATATG GCGCCCTGGC GGAAGCGATG GCTCGCTGGC AGGCAGCGCA GGTGAGCGCG ATCATCACGC TCACCCCACT GTTTACGCTG TTTTTTTCAG ATCTTTTATC ACTGGCCTGG CCCGATTTCT TCGCCAGACC GATGTTAAAC CTTTTAGGTT ATCTCGGTGC GTTTGTCGTG GTTGCGGGCG CGATGTATTC CACCATTGGT CATCGTATTT GGGGCGGATT ACGTAAGCAT ACAACGGTGG TATCGCAACC CCGCGCAGGC GAATGA
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Protein sequence | MKQQAGIGIL LALTTAICWG ALPIAMKQVL EVMEPPTIVF YRFLMASIGL GAILAVKKRL PPLRVFRKLR WLILLAVATA GLFGNFILFS SSLQYLSPTA SQVIGQLSPV GMMVASVFIL KEKMRSTQVV GALMLLSGLV MFFNTTLVEI FTKLTDYTWG VIFGVGAATV WVSYGVAQKV LLRRLASPQI LFLLYTLCTI ALFPLAKPGV IAQLSHWQLA CLIFCGLNTL VGYGALAEAM ARWQAAQVSA IITLTPLFTL FFSDLLSLAW PDFFARPMLN LLGYLGAFVV VAGAMYSTIG HRIWGGLRKH TTVVSQPRAG E
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