Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3569 |
Symbol | lptB |
ID | 6270611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3324061 |
End bp | 3324786 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641727439 |
Product | putative ABC transporter ATP-binding protein YhbG |
Protein accession | YP_001881884 |
Protein GI | 187730239 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.863605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACAT TAACTGCAAA GAACCTTGCA AAAGCCTATA AAGGCCGTCG CGTGGTAGAA GACGTCAGCC TGACCGTCAA CTCCGGGGAA ATTGTCGGTC TGCTGGGGCC AAACGGTGCC GGTAAGACCA CCACTTTCTA TATGGTTGTT GGCATTGTGC CGCGCGATGC GGGCAACATC ATTATTGATG ATGACGATAT CAGTCTGCTG CCTCTGCATG CACGCGCGCG CCGCGGTATC GGCTATCTGC CACAGGAAGC CTCCATTTTC CGTCGCCTCA GCGTTTACGA TAACCTGATG GCGGTACTGC AAATTCGTGA CGACTTGTCT GCTGAACAAC GTGAAGACCG CGCGAACGAG CTGATGGAAG AGTTTCACAT TGAGCACCTG CGTGACAGCA TGGGGCAGTC ACTCTCCGGG GGTGAACGTC GCCGTGTAGA AATTGCCCGC GCACTGGCTG CGAATCCGAA ATTTATTCTA CTCGACGAAC CGTTTGCCGG GGTTGACCCG ATCTCGGTTA TCGACATTAA ACGCATCATT GAACACCTGC GCGACAGCGG CCTGGGCGTA CTGATCACTG ACCACAACGT GCGTGAAACA CTGGCGGTTT GTGAACGCGC TTATATCGTC AGTCAGGGGC ATTTGATTGC CCACGGCACG CCTACAGAAA TCTTACAAGA CGAACACGTT AAGCGTGTAT ACCTTGGGGA AGACTTCAGA CTCTGA
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Protein sequence | MATLTAKNLA KAYKGRRVVE DVSLTVNSGE IVGLLGPNGA GKTTTFYMVV GIVPRDAGNI IIDDDDISLL PLHARARRGI GYLPQEASIF RRLSVYDNLM AVLQIRDDLS AEQREDRANE LMEEFHIEHL RDSMGQSLSG GERRRVEIAR ALAANPKFIL LDEPFAGVDP ISVIDIKRII EHLRDSGLGV LITDHNVRET LAVCERAYIV SQGHLIAHGT PTEILQDEHV KRVYLGEDFR L
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