Gene SbBS512_E3566 details

Gene Information

• Locus tag: SbBS512_E3566
• Symbol: ptsN
• ID: 6272220
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 3321661
• End bp: 3322152
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641727436
• Product: PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN
• Protein accession: YP_001881881
• Protein GI: 187733410
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAATA ATGATACAAC TCTACAGCTT AGCAGTGTTC TTAACAGGGA ATGTACGCGA 
AGCCGCGTTC ACTGTCAGAG CAAAAAACGC GCCCTGGAAA TCATCAGCGA GCTGGCGGCG 
AAACAACTTA GCCTGCCGCC TCAGGTGGTT TTTGAAGCTA TCCTGACGCG GGAAAAAATG 
GGCAGTACCG GTATCGGCAA TGGTATTGCC ATTCCGCATG GCAAACTGGA AGAAGATACT 
CTGCGCGCCG TTGGCGTTTT CGTTCAGCTC GAAACGCCTA TAGCTTTCGA TGCCATCGAC 
AACCAACCGG TGGACTTACT TTTTGCCCTG CTGGTGCCGG CAGACCAAAC TAAAACGCAC 
CTGCATACTC TGTCGCTGGT GGCGAAACGT CTGGCGGACA AAACCATCTG CCGCCGTTTA 
CGCGCAGCCC AGAGCGATGA AGAGCTGTAT CAAATCATTA CGGATACCGA AGGTACTCCG 
GATGAAGCGT AG 

 

Protein sequence

MTNNDTTLQL SSVLNRECTR SRVHCQSKKR ALEIISELAA KQLSLPPQVV FEAILTREKM 
GSTGIGNGIA IPHGKLEEDT LRAVGVFVQL ETPIAFDAID NQPVDLLFAL LVPADQTKTH 
LHTLSLVAKR LADKTICRRL RAAQSDEELY QIITDTEGTP DEA