Gene SbBS512_E3559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3559 
Symbol 
ID6269729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3314653 
End bp3315582 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content56% 
IMG OID641727429 
Productradical SAM protein, TIGR01212 family 
Protein accessionYP_001881875 
Protein GI187731284 
COG category[R] General function prediction only 
COG ID[COG1242] Predicted Fe-S oxidoreductase 
TIGRFAM ID[TIGR01212] radical SAM protein, TIGR01212 family 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTAC AGAAATTAGT CAATATGTTT GGTGGTGATC TCACCCGTCG TTATGGGCAA 
AAGGTGCATA AGCTGACGCT GCACGGCGGT TTTAGCTGCC CTAACCGTGA CGGTACCATC
GGGCGTGGTG GCTGCACATT CTGTAATGTT GCCTCGTTTG CCGATGAAGC GCAGCAGCAT
CGTTCCATTG CCGAGCAACT GGCGCACCAG GCGAATTTAG TTAACCGCGC TAAACGCTAT
CTGGCCTACT TTCAGGCGTA TACTAGCACC TTTGCGGAAG TTCAGGTGCT GCGTTCTATG
TATCAGCAGG CGGTGAGCCA GGCCAATATT GTCGGTTTGT GTGTTGGTAC CCGCCCGGAC
TGCGTGCCGG ATGCGGTGCT GGATCTGCTT TGCGAATATA AGGACCAGGG TTACGAAGTG
TGGCTGGAGC TGGGGCTACA AACCGCCCAC GACAAAACAC TGCATCGCAT CAACCGCGGC
CATGATTTTG CCTGTTATCA GCGTACAACC CAGCTGGCAC GTCAGCGCGG GCTGAAGGTG
TGTTCCCACT TAATTGTCGG CCTGCCTGGC GAAGGGCAGG CTGAATGTTT GCAAACGCTG
GAGCGAGTGG TTGAAACCGG CGTGGACGGC ATAAAGCTGC ATCCGCTGCA TATTGTGAAA
GGCAGCATTA TGGCGAAAGC CTGGGAAGCG GGGCGTTTGA ACGGTATTGA ACAGGAGGAT
TACACGCTCA CTGCCGGAGA AATGATTCGC CATACGCCAC CGGAAGTGAT CTACCACCGC
ATTTCCGCCA GCGCCCGTCG CCCGACGCTG CTTGCTCCGC TGTGGTGCGA AAATCGATGG
ACGGGAATGG TCGAGCTGGA TCGCTATCTG AATGAACATG GCGTACAGGG ATCGGCGCTG
GGACGTCCGT GGCTACCTCC AACGGAGTAG
 
Protein sequence
MQLQKLVNMF GGDLTRRYGQ KVHKLTLHGG FSCPNRDGTI GRGGCTFCNV ASFADEAQQH 
RSIAEQLAHQ ANLVNRAKRY LAYFQAYTST FAEVQVLRSM YQQAVSQANI VGLCVGTRPD
CVPDAVLDLL CEYKDQGYEV WLELGLQTAH DKTLHRINRG HDFACYQRTT QLARQRGLKV
CSHLIVGLPG EGQAECLQTL ERVVETGVDG IKLHPLHIVK GSIMAKAWEA GRLNGIEQED
YTLTAGEMIR HTPPEVIYHR ISASARRPTL LAPLWCENRW TGMVELDRYL NEHGVQGSAL
GRPWLPPTE