| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3542 |
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| Symbol | degQ |
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| ID | 6271575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 3293932 |
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| End bp | 3295299 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641727413 |
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| Product | serine endoprotease |
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| Protein accession | YP_001881859 |
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| Protein GI | 187731297 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0199857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC AAACCCAGCT GTTGAGTGCA TTAGCGTTAA GTGTCGGGTT AACTCTCTCG
GCGTCATTTC AGGCCGTCGC GTCGATTCCA GGCCAGGTTG CCGATCAGGC CCCTCTCCCC
AGTCTGGCTC CAATGCTGGA AAAAGTGCTT CCGGCAGTGG TGAGCGTACG GGTGGAAGGA
ACGGCCAGTC AGGGACAGAA AATCCCGGAA GAATTCAAAA AGTTTTTTGG TGATGATTTA
CCGGATCAAC CTGCACAACC CTTCGAAGGT TTAGGTTCCG GTGTCATCAT CAACGCCAGT
AAAGGCTATG TGCTGACCAA CAACCATGTG ATTAATCAGG CACAGAAAAT CAGTATTCAG
CTCAATGATG GGCGCGAGTT TGATGCCAAA CTGATTGGTA GCGATGACCA GAGCGATATC
GCCCTGTTAC AAATTCAAAA CCCGAGCAAA TTAACGCAAA TCGCTATTGC CGACTCCGAT
AAATTGCGCG TCGGTGATTT TGCCGTAGCG GTCGGTAACC CATTTGGCCT TGGGCAAACC
GCCACCTCTG GCATTGTTTC CGCATTAGGC CGCAGCGGGT TGAATCTTGA AGGTCTGGAA
AACTTTATCC AGACAGATGC TTCCATTAAC CGCGGTAACT CCGGCGGTGC ACTATTAAAC
CTTAACGGTG AGTTAATTGG CATCAACACT GCAATCCTTG CGCCTGGCGG CGGGAGCGTC
GGGATTGGAT TTGCCATCCC CAGTAATATG GCGCGAACAC TGGCGCAGCA GCTTATCGAC
TTTGGTGAAA TCAAACGCGG TTTGTTAGGC ATCAAAGGCA CCGAGATGAG TGCCGATATC
GCCAAAGCCT TCAACCTTGA CGTGCAGCGT GGCGCGTTTG TCAGCGAAGT GTTGCCAGGT
TCTGGCTCGG CAAAAGCGGG CGTCAAAGCG GGCGATATTA TTACCAGCCT CAACGGCAAA
CCGCTGAATA GCTTTGCTGA GTTGCGCTCT CGTATCGCGA CTACAGAGCC GGGCACGAAA
GTGAAGCTTG GCCTGCTGCG TAACGGCAAA CCACTGGAAG TAGAAGTGAC GCTTGATACC
AGCACCTCTT CGTCGGCCAG CGCTGAAATG ATCACGCCAG CGCTGGAAGG TGCAACGTTG
AGCGATGGTC AGCTAAAAGA TGGCGGCAAA GGTATTAAGA TCGATGAAGT TGTCAAAGGA
AGCCCAGCTG CTCAGGCAGG CTTGCAAAAA GACGATGTGA TCATTGGCGT CAACCGCGAT
CGGGTGAACT CGATTGCTGA AATGCGTAAA GTGCTGGCGG CAAAACCGGC CATCATCGCC
CTGCAAATTG TACGCGGCAA TGAAAGCATC TATCTGCTGA TGCGTTAA
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| Protein sequence | MKKQTQLLSA LALSVGLTLS ASFQAVASIP GQVADQAPLP SLAPMLEKVL PAVVSVRVEG
TASQGQKIPE EFKKFFGDDL PDQPAQPFEG LGSGVIINAS KGYVLTNNHV INQAQKISIQ
LNDGREFDAK LIGSDDQSDI ALLQIQNPSK LTQIAIADSD KLRVGDFAVA VGNPFGLGQT
ATSGIVSALG RSGLNLEGLE NFIQTDASIN RGNSGGALLN LNGELIGINT AILAPGGGSV
GIGFAIPSNM ARTLAQQLID FGEIKRGLLG IKGTEMSADI AKAFNLDVQR GAFVSEVLPG
SGSAKAGVKA GDIITSLNGK PLNSFAELRS RIATTEPGTK VKLGLLRNGK PLEVEVTLDT
STSSSASAEM ITPALEGATL SDGQLKDGGK GIKIDEVVKG SPAAQAGLQK DDVIIGVNRD
RVNSIAEMRK VLAAKPAIIA LQIVRGNESI YLLMR
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