| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3431 |
|---|
| Symbol | |
|---|
| ID | 6272747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 3191647 |
|---|
| End bp | 3192141 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641727317 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001881766 |
|---|
| Protein GI | 187732008 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2862] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00645] conserved hypothetical transmembrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGTT TTCTTGAAAA TGCAATGTAT GCTTCTCGCT GGCTGCTTGC CCCCGTGTAC
TTTGGCCTTT CGCTGGCGTT AGTTGCCCTG GCGCTGAAGT TCTTCCAGGA GATTATTCAC
GTACTGCCGA ATATCTTCTC GATGGCGGAA TCAGATTTGA TCCTCGTGTT GCTGTCGCTG
GTGGATATGA CGCTGGTTGG CGGTTTGCTG GTGATGGTGA TGTTTTCCGG TTATGAGAAT
TTCGTCTCGC AGCTGGATAT CTCCGAGAAC AAAGAGAAGC TGAACTGGCT GGGGAAAATG
GACGCAACGT CGCTGAAAAA CAAAGTAGCA GCGTCGATTG TGGCAATTTC TTCCATTCAC
TTACTGCGCG TCTTTATGGA TGCGAAAAAT GTCCCGGATA ACAAACTGAT GTGGTACGTC
ATTATCCATC TGACGTTTGT GCTCTCTGCA TTTGTGATGG GCTATCTTGA CCGACTGACT
CGTCATAATC ACTGA
|
|---|
| Protein sequence | MERFLENAMY ASRWLLAPVY FGLSLALVAL ALKFFQEIIH VLPNIFSMAE SDLILVLLSL
VDMTLVGGLL VMVMFSGYEN FVSQLDISEN KEKLNWLGKM DATSLKNKVA ASIVAISSIH
LLRVFMDAKN VPDNKLMWYV IIHLTFVLSA FVMGYLDRLT RHNH
|
|---|
| |