Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3369 |
Symbol | |
ID | 6272850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3135133 |
End bp | 3135891 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641727260 |
Product | peptidase, M48B family |
Protein accession | YP_001881710 |
Protein GI | 187731061 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.433794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTC GCGCCTTATT GGTAGCAATG AGCGTGGCAA CGGTACTGAC TGGTTGCCAG AATATGGACT CCAACGGACT GCTCTCATCA GGAGCGGAAG CTTTTCAGGC TTACAGTTTG AGTGATGCGC AGGTGAAAAC CCTGAGCGAT CAGGCATGTC AGGAGATGGA CAGCAAGGCG ACGATTGCGC CAGCCAATAG CGAATACGCT AAACGTCTGA CAACTATTGC CAATGCGCTA GGCAACAATA TCAACGGTCA GCCGGTGAAT TACAAAGTGT ATATGGCGAA GGATGTGAAC GCCTTTGCAA TGGCTAACGG CTGTATCCGC GTCTATAGCG GGCTGATGGA TATGATGACG GATAACGAAG TCGAAGCGGT GATCGGTCAC GAGATGGGGC ACGTGGCGTT AGGCCATGTG AAGAAAGGGA TGCAGGTGGC GCTTGGTACA AATGCCGTGC GAGTAGCTGC GGCCTCTGCG GGCGGGATTG TCGGCAGTTT ATCTCAATCA CAACTTGGTG ATCTGGGCGA GAAATTAGTC AATTCGCAAT TCTCCCAGCG CCAGGAAGCA GAAGCCGATG ATTATTCTTA CGATCTTCTG CGCCAACGCG GCATCAGCCC GGCAGGTCTT GCCACCAGCT TTGAAAAACT GGCGAAACTG GAAGAAGGCC GCCAAAGCTC AATGTTTGAC GACCATCCGG CATCCGCCGA ACGCGCCCAG CATATTCGCG ATCGCATGAG CGCGGATGGG ATTAAGTAA
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Protein sequence | MKIRALLVAM SVATVLTGCQ NMDSNGLLSS GAEAFQAYSL SDAQVKTLSD QACQEMDSKA TIAPANSEYA KRLTTIANAL GNNINGQPVN YKVYMAKDVN AFAMANGCIR VYSGLMDMMT DNEVEAVIGH EMGHVALGHV KKGMQVALGT NAVRVAAASA GGIVGSLSQS QLGDLGEKLV NSQFSQRQEA EADDYSYDLL RQRGISPAGL ATSFEKLAKL EEGRQSSMFD DHPASAERAQ HIRDRMSADG IK
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