| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3276 |
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| Symbol | tldD |
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| ID | 6268962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 3047693 |
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| End bp | 3049138 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641727182 |
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| Product | protease TldD |
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| Protein accession | YP_001881635 |
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| Protein GI | 187730693 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTCTTA ACCTGGTAAG TGAACAATTG CTAGCGGCGA ACGGCCTGAA ACATCAGGAC
TTGTTCGCGA TCCTCGGTCA ACTGGCCGAA CGTCGCCTTG ATTATGGCGA TCTCTATTTT
CAGTCGAGCT ATCACGAATC CTGGGTTTTA GAAGACCGCA TTATTAAAGA TGGTTCTTAC
AACATCGATC AGGGCGTTGG CGTGCGTGCA ATCAGCGGTG AAAAAACCGG ATTTGCTTAC
GCTGACCAAA TCAGCCTGCT GGCGCTGGAA CAGAGTGCGC AAGCGGCGCG CACCATCGTC
CGTGATAGTG GTGATGGCAA AGTACAGACG CTGGGCGCGG TAGGGCATAG CCCGTTGTAT
ACCTCGGTAG ATCCGCTGCA AAGCATGAGC CGTGAAGAGA AGCTGGATAT CCTGCGTCGC
GTCGATAAGG TTGCTCGCGA AGCGGACAAG CGCGTACAGG AAGTGACTGC CAGCCTCAGT
GGTGTCTATG AATTAATTCT GGTTGCGGCC ACCGACGGCA CGCTAGCGGC GGATGTCCGT
CCGCTGGTGC GTCTTTCCGT GAGCGTTCTG GTCGAAGAAG ATGGCAAACG CGAACGCGGT
GCCGGTGGCG GTGGCGGTCG TTTTGGTTAT GAGTTCTTCC TTGCCGATCT TGACGGCGAA
GTCCGTGCGG ATGCATGGGC AAAAGAAGCA GTGCGTATGG CGCTGGTCAA TCTTTCTGCC
GTTGCTGCAC CAGCGGGCAC CATGCCGGTA GTACTTGGCG CAGGTTGGCC GGGCGTGCTG
TTGCATGAAG CGGTAGGTCA CGGTCTGGAA GGCGACTTCA ACCGCCGCGG CACTTCAGTA
TTTAGTGGGC AGGTCGGGGA GCTGGTGGCT TCAGAACTGT GTACCGTGGT TGATGACGGC
ACGATGGTCG ATCGCCGTGG TTCGGTGGCG ATTGATGACG AAGGTACGCC AGGCCAGTAC
AACGTGCTGA TTGAGAACGG CATTCTGAAA GGCTACATGC AGGATAAACT CAACGCGCGT
TTGATGGGGA TGACGCCGAC TGGCAACGGT CGCCGTGAAT CCTACGCCCA TCTGCCCATG
CCGCGTATGA CCAACACCTA TATGCTGCCG GGTAAATCGA CCCCGCAGGA AATTATTGAA
TCCGTTGAGT ACGGTATCTA TGCACCGAAC TTTGGTGGCG GTCAGGTGGA TATCACCTCC
GGCAAATTCG TTTTCTCCAC TTCAGAAGCA TATCTGATTG AAAACGGTAA AGTAACGAAG
CCGGTGAGAG GCGCAACGTT GATTGGTTCC GGTATCGAAA CCATGCAGCA GATTTCGATG
GTTGGCAACG ACCTGAAACT GGATAACGGC GTAGGTGTCT GCGGTAAAGA AGGGCAAAGT
TTGCCGGTTG GCGTGGGCCA GCCAACGCTG AAAGTTGATA ACCTGACTGT TGGCGGTACT
GCGTAA
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| Protein sequence | MTLNLVSEQL LAANGLKHQD LFAILGQLAE RRLDYGDLYF QSSYHESWVL EDRIIKDGSY
NIDQGVGVRA ISGEKTGFAY ADQISLLALE QSAQAARTIV RDSGDGKVQT LGAVGHSPLY
TSVDPLQSMS REEKLDILRR VDKVAREADK RVQEVTASLS GVYELILVAA TDGTLAADVR
PLVRLSVSVL VEEDGKRERG AGGGGGRFGY EFFLADLDGE VRADAWAKEA VRMALVNLSA
VAAPAGTMPV VLGAGWPGVL LHEAVGHGLE GDFNRRGTSV FSGQVGELVA SELCTVVDDG
TMVDRRGSVA IDDEGTPGQY NVLIENGILK GYMQDKLNAR LMGMTPTGNG RRESYAHLPM
PRMTNTYMLP GKSTPQEIIE SVEYGIYAPN FGGGQVDITS GKFVFSTSEA YLIENGKVTK
PVRGATLIGS GIETMQQISM VGNDLKLDNG VGVCGKEGQS LPVGVGQPTL KVDNLTVGGT
A
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