| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3260 |
|---|
| Symbol | |
|---|
| ID | 6268642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 3038508 |
|---|
| End bp | 3038900 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641727168 |
|---|
| Product | putative inner membrane protein YqjF |
|---|
| Protein accession | YP_001881621 |
|---|
| Protein GI | 187730733 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2259] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TAGAAGATGT TGGTGTACTG GTAGCGCGCA TTTTAATGCC GATTCTGTTT
ATTACCGCAG GCTGGGGAAA AATCACCGCT TACTCTGGTA CCCAACAATA TATGGAAGCA
ATGGGTGTCC CGGGTTTTAT GCTGCCGCTG GTGATTCTGC TTGAGTTCGG TGGTGGTCTG
GCTATCCTGT TCGGTTTCCT GACTCGCACC ACAGCCCTGT TTACTGCGGG CTTTACGCTG
CTGACGGCAT TTTTATTTCA CAGCAAGTTT GCTGAAGGCG TCAACTCGCT GATGTTCATG
AAAAACCTGA CAATTTCTGG CGGATTCCTG CTGCTGGCAA TTACCGGTCC GGGCGCGTAT
AGCATCGACC GCCTGCTGAA TAAAAAGTGG TAA
|
|---|
| Protein sequence | MKKLEDVGVL VARILMPILF ITAGWGKITA YSGTQQYMEA MGVPGFMLPL VILLEFGGGL
AILFGFLTRT TALFTAGFTL LTAFLFHSKF AEGVNSLMFM KNLTISGGFL LLAITGPGAY
SIDRLLNKKW
|
|---|
| |