Gene SbBS512_E3221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3221 
Symbol 
ID6268643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3003238 
End bp3004506 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content57% 
IMG OID641727134 
Producthydroxyglutarate oxidase 
Protein accessionYP_001881588 
Protein GI187731092 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGATT TTGTGATTAT TGGCGGCGGC ATCATCGGCA TGTCGACCGC CATGCAACTG 
ATTGATGTTT ATCCGGATGC CCGCATTGCG TTGCTGGAAA AAGAGTCCGG CCCGGCCTGT
CACCAGACGG GCCACAACAG CGGCGTGATC CATGCCGGGG TCTATTACAC GCCCGGCAGC
CTGAAGGCGC AGTTTTGCCT GGCGGGAAAC CGCGCCACCA AAGCCTTTTG CGATCAAAAC
GACATTCGCT ATGACAACTG CGGCAAGATG CTGATCGCCA CGTCCGATCT CGAAATGGAA
CGGATGCGCG CGTTGTGGGA ACGCACGGCG GCGAACGGTA TCGAGCGCGA GTGGTTAAAC
GCCGAGGAAC TGCGCGAGCG CGAACCGAAT ATCACCGGGC TCGGCGGCAT TTTTGTGCCG
TCCAGCGGCA TTGTCAGCTA TCGCGAAGTC ACAGCGGCAA TGGCAAAAAT CTTCCAGGCC
AGAGGCGGTG AGATTATTTA TAACGCCGAA GTCAGCGCCC TCAGTGAGCA TAAAAACGGC
GTGGTCGTCC GAACCCGTCA GGGCGGCGAA TATGAAGCAT CGACGCTGAT TAGCTGTTCC
GGGCTGATGG CTAACCGGCT GGTGAAAATG CTCGGCCTCG AACCGGGTTT TATTATCTGC
CCGTTCCGTG GCGAGTATTT CCGCCTTGCG CCGGAGCATA ACCAGATTGT TAACCATCTG
ATTTACCCCA TCCCTGACCC GGCAATGCCG TTTTTGGGCG TGCATCTCAC CCGCATGATC
GACGGCAGCG TGACCGTCGG GCCAAACGCG GTGCTGGCTT TTAAACGCGA AGGCTATCGC
AAGCGCGACT TCTCATTTAG CGACACGCTG GAAATTTTAG GCTCGTCGGG GATTCGCCGG
GTGCTGCAAA ACCATCTACG CTCAGGACTG GGCGAGATGA AAAACTCGCT GTGCAAAAGC
GGCTATCTGC GGCTGGTGCA AAAGTATTGT CCCCGGCTTT CGTTAAGCGA TCTCCAGCCC
TGGCCCGCCG GTGTGCGGGC GCAGGCGGTA TCGCCGGACG GCAAGCTGAT TGACGATTTT
CTGTTTGTCA CCACCCCGCG CACGATCCAC ACCTGCAATG CGCCCTCCCC GGCAGCGACA
TCAGCAATTC CTATTGGTGC GCATATTGTC AGCAAGGTAC AAACGCTGTT GGCAAGCCAG
AGTAACCCCG GACGCACGCT GCGAGCGACA CGTAGTGTGG ATGCCTTACA CGCCGCATTT
AATCAATAA
 
Protein sequence
MYDFVIIGGG IIGMSTAMQL IDVYPDARIA LLEKESGPAC HQTGHNSGVI HAGVYYTPGS 
LKAQFCLAGN RATKAFCDQN DIRYDNCGKM LIATSDLEME RMRALWERTA ANGIEREWLN
AEELREREPN ITGLGGIFVP SSGIVSYREV TAAMAKIFQA RGGEIIYNAE VSALSEHKNG
VVVRTRQGGE YEASTLISCS GLMANRLVKM LGLEPGFIIC PFRGEYFRLA PEHNQIVNHL
IYPIPDPAMP FLGVHLTRMI DGSVTVGPNA VLAFKREGYR KRDFSFSDTL EILGSSGIRR
VLQNHLRSGL GEMKNSLCKS GYLRLVQKYC PRLSLSDLQP WPAGVRAQAV SPDGKLIDDF
LFVTTPRTIH TCNAPSPAAT SAIPIGAHIV SKVQTLLASQ SNPGRTLRAT RSVDALHAAF
NQ