Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3221 |
Symbol | |
ID | 6268643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3003238 |
End bp | 3004506 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641727134 |
Product | hydroxyglutarate oxidase |
Protein accession | YP_001881588 |
Protein GI | 187731092 |
COG category | [R] General function prediction only |
COG ID | [COG0579] Predicted dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGATT TTGTGATTAT TGGCGGCGGC ATCATCGGCA TGTCGACCGC CATGCAACTG ATTGATGTTT ATCCGGATGC CCGCATTGCG TTGCTGGAAA AAGAGTCCGG CCCGGCCTGT CACCAGACGG GCCACAACAG CGGCGTGATC CATGCCGGGG TCTATTACAC GCCCGGCAGC CTGAAGGCGC AGTTTTGCCT GGCGGGAAAC CGCGCCACCA AAGCCTTTTG CGATCAAAAC GACATTCGCT ATGACAACTG CGGCAAGATG CTGATCGCCA CGTCCGATCT CGAAATGGAA CGGATGCGCG CGTTGTGGGA ACGCACGGCG GCGAACGGTA TCGAGCGCGA GTGGTTAAAC GCCGAGGAAC TGCGCGAGCG CGAACCGAAT ATCACCGGGC TCGGCGGCAT TTTTGTGCCG TCCAGCGGCA TTGTCAGCTA TCGCGAAGTC ACAGCGGCAA TGGCAAAAAT CTTCCAGGCC AGAGGCGGTG AGATTATTTA TAACGCCGAA GTCAGCGCCC TCAGTGAGCA TAAAAACGGC GTGGTCGTCC GAACCCGTCA GGGCGGCGAA TATGAAGCAT CGACGCTGAT TAGCTGTTCC GGGCTGATGG CTAACCGGCT GGTGAAAATG CTCGGCCTCG AACCGGGTTT TATTATCTGC CCGTTCCGTG GCGAGTATTT CCGCCTTGCG CCGGAGCATA ACCAGATTGT TAACCATCTG ATTTACCCCA TCCCTGACCC GGCAATGCCG TTTTTGGGCG TGCATCTCAC CCGCATGATC GACGGCAGCG TGACCGTCGG GCCAAACGCG GTGCTGGCTT TTAAACGCGA AGGCTATCGC AAGCGCGACT TCTCATTTAG CGACACGCTG GAAATTTTAG GCTCGTCGGG GATTCGCCGG GTGCTGCAAA ACCATCTACG CTCAGGACTG GGCGAGATGA AAAACTCGCT GTGCAAAAGC GGCTATCTGC GGCTGGTGCA AAAGTATTGT CCCCGGCTTT CGTTAAGCGA TCTCCAGCCC TGGCCCGCCG GTGTGCGGGC GCAGGCGGTA TCGCCGGACG GCAAGCTGAT TGACGATTTT CTGTTTGTCA CCACCCCGCG CACGATCCAC ACCTGCAATG CGCCCTCCCC GGCAGCGACA TCAGCAATTC CTATTGGTGC GCATATTGTC AGCAAGGTAC AAACGCTGTT GGCAAGCCAG AGTAACCCCG GACGCACGCT GCGAGCGACA CGTAGTGTGG ATGCCTTACA CGCCGCATTT AATCAATAA
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Protein sequence | MYDFVIIGGG IIGMSTAMQL IDVYPDARIA LLEKESGPAC HQTGHNSGVI HAGVYYTPGS LKAQFCLAGN RATKAFCDQN DIRYDNCGKM LIATSDLEME RMRALWERTA ANGIEREWLN AEELREREPN ITGLGGIFVP SSGIVSYREV TAAMAKIFQA RGGEIIYNAE VSALSEHKNG VVVRTRQGGE YEASTLISCS GLMANRLVKM LGLEPGFIIC PFRGEYFRLA PEHNQIVNHL IYPIPDPAMP FLGVHLTRMI DGSVTVGPNA VLAFKREGYR KRDFSFSDTL EILGSSGIRR VLQNHLRSGL GEMKNSLCKS GYLRLVQKYC PRLSLSDLQP WPAGVRAQAV SPDGKLIDDF LFVTTPRTIH TCNAPSPAAT SAIPIGAHIV SKVQTLLASQ SNPGRTLRAT RSVDALHAAF NQ
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