Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3155 |
Symbol | hycE |
ID | 6269263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2946449 |
End bp | 2948158 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641727073 |
Product | formate hydrogenlyase, subunit E |
Protein accession | YP_001881532 |
Protein GI | 187733129 |
COG category | [C] Energy production and conversion |
COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit [COG3261] Ni,Fe-hydrogenase III large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAG AAAAATTAGG TCAACATTAT CTCGCCGCGC TGAATGAGGC ATTTCCGGGC GTCGTGCTGG ACCACGCCTG GCAGACCAAA GATCAGCTGA CTATCACCGT AAAGGTGAAC TATCTGCCGG AAGTGGTGGA GTTTCTCTAC TACAAGCAGG GGGGCTGGCT GTCGGTGCTT TTTGGTAACG ACGAACGCAA ACTGAATGGT CATTACGCCG TTTATTACGT GCTGTCGATG GAGAAGGGGA CTAAGTGCTG GGTAACGGTT CGCGTCGAAG TTGATGCCAA CAAACCGGAG TATCCGTCCG TGACGCCGCG CGTTCCGGCG GCGGTGTGGG GCGAGCGCGA AGTGCGCGAT ATGTACGGTT TGATTCCGGT TGGTCTGCCG GATGAACGCC GTCTGGTGCT GCCGGATGAC TGGCCGGATG AACTTTATCC GCTGCGTAAA GACAGCATGG ATTATCGTCA GCGTCCGGCA CCGACCACCG ATGCTGAAAC CTACGAGTTC ATCAACGAAC TGGGCGACAA GAAAAACAAC GTCGTGCCGA TTGGTCCGCT GCACGTCACT TCTGACGAAC CGGGCCACTT CCGTCTGTTC GTCGATGGCG AAAACATTAT CGACGCAGAC TACCGCTTGT TCTATGTCCA TCGCGGTATG GAAAAACTGG CGGAAACCCG CATGGGTTAT AACGAAGTGA CCTTCCTCTC TGACCGTGTG TGCGGGATCT GCGGCTTCGC CCACAGCACC GCCTACACCA CGTCGGTGGA AAACGCGATG GGTATTCAGG TGCCAGAACG TGCGCAGATG ATCCGCGCCA TTCTGCTGGA GGTGGAACGC CTGCACTCGC ATCTGCTCAA CCTCGGCCTC GCCTGCCACT TTACCGGCTT CGACTCCGGC TTTATGCAGT TCTTCCGCGT GCGTGAAACC TCCATGAAAA TGGCCGAGAT CCTCACCGGT GCGCGTAAAA CCTACGGCCT GAACCTGATC GGCGGGATTC GTCGCGATCT GTTGAAAGAT GACATGATCC AGACCCGCCA GCTGGCGCAA CAGATGCGTC GTGAAGTGCA GGAGCTGGTG GATGTGCTGC TGAGCACACC GAACATGGAA CAGCGCACCA TCGGCATTGG TCGTCTGGAC CCGGAAATTG CCCGCGATTT CAGTAACGTT GGCCCGATGG TCCGCGCCAG CGGACACGCT CGCGATACCC GCGCTGATCA CCCGTTTGTT GGTTATGGCC TGCTGCCAAT GGAAGTCCAC AGCGAGCAGG GCTGCGACGT TATTTCGCGT CTGAAAGTGC GTATCAACGA AGTCTATACC GCGCTGAACA TGATCGACTA CGGTCTGGAT AACCTGCCGG GTGGCCCGCT GATGGTGGAA GGCTTTACCT ACATTCCGCA CCGTTTCGCG CTGGGCTTTG CCGAAGCGCC GCGCGGTGAT GATATCCACT GGAGCATGAC TGGCGACAAC CAGAAGCTGT ACCGCTGGCG CTGCCGTGCC GCGACCTACG CGAACTGGCC GACCCTGCGC TACATGCTGC GTGGCAACAC TGTTTCCGAT GCGCCGCTGA TTATCGGTAG CCTGGACCCT TGCTACTCCT GTACCGACCG CATGACTGTG GTCGATGTAC GTAAGAAGAA GAGCAAAGTG GTGCCGTACA AAGAACTCGA GCGCTACAGC ATTGAGCGTA AAAACTCGCC GCTGAAATAA
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Protein sequence | MSEEKLGQHY LAALNEAFPG VVLDHAWQTK DQLTITVKVN YLPEVVEFLY YKQGGWLSVL FGNDERKLNG HYAVYYVLSM EKGTKCWVTV RVEVDANKPE YPSVTPRVPA AVWGEREVRD MYGLIPVGLP DERRLVLPDD WPDELYPLRK DSMDYRQRPA PTTDAETYEF INELGDKKNN VVPIGPLHVT SDEPGHFRLF VDGENIIDAD YRLFYVHRGM EKLAETRMGY NEVTFLSDRV CGICGFAHST AYTTSVENAM GIQVPERAQM IRAILLEVER LHSHLLNLGL ACHFTGFDSG FMQFFRVRET SMKMAEILTG ARKTYGLNLI GGIRRDLLKD DMIQTRQLAQ QMRREVQELV DVLLSTPNME QRTIGIGRLD PEIARDFSNV GPMVRASGHA RDTRADHPFV GYGLLPMEVH SEQGCDVISR LKVRINEVYT ALNMIDYGLD NLPGGPLMVE GFTYIPHRFA LGFAEAPRGD DIHWSMTGDN QKLYRWRCRA ATYANWPTLR YMLRGNTVSD APLIIGSLDP CYSCTDRMTV VDVRKKKSKV VPYKELERYS IERKNSPLK
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