| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3154 |
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| Symbol | hycD |
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| ID | 6272980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 2945508 |
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| End bp | 2946431 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641727072 |
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| Product | formate hydrogenlyase, subunit D |
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| Protein accession | YP_001881531 |
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| Protein GI | 187733548 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0650] Formate hydrogenlyase subunit 4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGTTT TATATCCGTT AATTCAGGCG CTGGTGTTAT TTGCCGTTGC GCCGCTGCTC
TCCGGTATTA CCCGCGTGGC GCGCGCCCGT CTGCATAACC GTCGCGGGCC GGGCGTGTTG
CAGGAGTATC GCGACATTAT CAAACTGCTG GGCCGCCAGA GCGTTGGCCC GGATGCCTCT
GGCTGGGTGT TCCGCCTGAC GCCGTATGTG ATGGTGGGCG TCATGCTGAC TATCGCTACT
GCGCTGCCGG TGGTGACCGT CGGTTCTCCG CTGCCGCAAC TGGGCGATTT GATCACCTTA
CTGTATCTCT TCGCCATCGC GCGTTTCTTC TTTGCCATTT CCGGTCTGGA TACCGGTAGC
CCGTTTACCG CTATCGGTGC GAGCCGTGAA GCGATGCTTG GCGTGCTGGT CGAACCGATG
TTGCTGCTTG GTCTGTGGGT TGCCGCACAG GTTGCCGGTT CCACCAACAT CAGCAACATT
ACCGACACCG TTTATCACTG GCCGCTGAGC CAAAGCATCC CGCTGGTGCT GGCGCTCTGC
ACCTGTGCGT TCGCCACTTT TATCGAAATG GGCAAACTGC CGTTCGACCT GGCGGAAGCC
GAGCAGGAGT TGCAGGAAGG TCCGCTCTCT GAGTATAGCG GCAGCGGCTT TGGCGTCATG
AAATGGGGTA TCAGCCTGAA ACAGCTGGTG GTGTTGCAGA TGTTCGTCGG GGTGTTTATT
CCGTGGGGAC AAATGGAAAC CTTCACCGCC GGTGGACTGC TGCTGGCGCT GGTGATTGCC
ATCGTAAAAC TGGTGGTCGG CGTCCTGGTT ATCGCGCTGT TCGAAAACAG CATGGCCCGT
CTGCGTCTTG ATATTACTCC GCGCATTACC TGGGCTGGGT TTGGCTTTGC ATTTTTAGCG
TTCGTCTCCT TGCTGGCGGC GTGA
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| Protein sequence | MSVLYPLIQA LVLFAVAPLL SGITRVARAR LHNRRGPGVL QEYRDIIKLL GRQSVGPDAS
GWVFRLTPYV MVGVMLTIAT ALPVVTVGSP LPQLGDLITL LYLFAIARFF FAISGLDTGS
PFTAIGASRE AMLGVLVEPM LLLGLWVAAQ VAGSTNISNI TDTVYHWPLS QSIPLVLALC
TCAFATFIEM GKLPFDLAEA EQELQEGPLS EYSGSGFGVM KWGISLKQLV VLQMFVGVFI
PWGQMETFTA GGLLLALVIA IVKLVVGVLV IALFENSMAR LRLDITPRIT WAGFGFAFLA
FVSLLAA
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