| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3150 |
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| Symbol | hypB |
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| ID | 6270837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2941130 |
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| End bp | 2942002 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641727069 |
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| Product | hydrogenase nickel incorporation protein HypB |
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| Protein accession | YP_001881528 |
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| Protein GI | 187732261 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTACAA CATGCGGTTG CGGTGAAGGC AACCTGTATA TCGAGGGTGA TGAACATAAC
CCTCATTCCG CGTTTCGTAG CGCGCCATTT GCCCCGGCGG CACGCCCGAA GATGAAAATC
ACCGGCATTA AAGCGCCTGA ATTTACCCCC AGCCAGACTG AAGAAGGCGA CCTGCATTAC
GGTCATGGCG AAGCGGGCAC TCACGCACCG GGCATGAGCC AGCGTCGGAT GCTGGAAGTC
GAAATTGACG TGCTGGACAA AAACAACCGT CTGGCTGAAC GCAACCGCGC GCGCTTTGCT
GCCCGCAAGC AACTGGTGCT CAACCTGGTT TCCAGCCCAG GTTCCGGTAA AACCACCCTG
CTGACGGAAA CCCTAATGCG CCTGAAAGAC AGCGTTCCGT GCGCGGTTAT TGAAGGTGAC
CAGCAAACCG TGAACGATGC CGCACGCATT CGCGCTACCG GCACACCAGC GATTCAGGTG
AACACAGGTA AAGGCTGCCA TCTTGACGCA CAGATGATTG CCGACGCCGC ACCGCGTCTG
CCACTGGACG ATAACGGTAT TCTGTTTATC GAAAACGTTG GCAACCTCGT ATGCCCGGCC
AGCTTCGATC TCGGTGAAAA ACACAAAGTG GCGGTGCTTT CCGTTACCGA AGGTGAAGAC
AAACCGCTGA AATATCCGCA TATGTTTGCC GCCGCCTCGC TGATGCTGCT CAACAAAGTT
GACCTGTTGC CGTATCTCAA CTTTGACGTT GAGAAGTGCA TCGCCTGCGC CCGCGAAGTC
AATCCAGAAA TTGAAATCAT CCTTATTTCC GCCACCAGCG GTGAAGGGAT GGACCAGTGG
CTGAACTGGC TGGAGACACA GCGATGTGCA TAG
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| Protein sequence | MCTTCGCGEG NLYIEGDEHN PHSAFRSAPF APAARPKMKI TGIKAPEFTP SQTEEGDLHY
GHGEAGTHAP GMSQRRMLEV EIDVLDKNNR LAERNRARFA ARKQLVLNLV SSPGSGKTTL
LTETLMRLKD SVPCAVIEGD QQTVNDAARI RATGTPAIQV NTGKGCHLDA QMIADAAPRL
PLDDNGILFI ENVGNLVCPA SFDLGEKHKV AVLSVTEGED KPLKYPHMFA AASLMLLNKV
DLLPYLNFDV EKCIACAREV NPEIEIILIS ATSGEGMDQW LNWLETQRCA
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