Gene SbBS512_E3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3118 
Symbolcse3 
ID6269145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp2912591 
End bp2913241 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content55% 
IMG OID641727043 
ProductCRISPR-associated protein, Cse3 family 
Protein accessionYP_001881502 
Protein GI187733988 
COG category 
COG ID 
TIGRFAM ID[TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCTCT CAAGAATAAC CTTACATACC GGCCAGCTTT CGCCTGCGCA GTTGCTGCAT 
CTGGTGGATC GCGGTGAATA TGTGATGCAT CAGTGGCTGT GGGATCTCTT CCCTAGCGGC 
AAAGAAAGGC AATTTCTTTA TCGTCGGGAA GAACTCCAGG GCGCGTTTCG CTTTTTTGTA 
CTGTCGCAGG AACGCCCGGC GGAAAGTGAT ACGTTCACCA TAGAATGCCG GTCATTTGCG 
CCCGAGCTGT GTACCGGACA ACAACTTTGT TTCAACCTGC GGGCGAATCC AACAATCTGT 
AAAGCGGGCA AGCGCCACGA TCTGCTGATG GAGGCGAAAC GGCAGGTGAG GGGGCAGGCG 
GAAGGAAGTG ATGTCTGGTT GCATCAACAA CAGGCGGCGC TGGACTGGCT GGCAGCCCAG 
GGGGAGAGAA GTGGTTTTAC ACTGCTGGAT ACCTCGGTTG ATGCCTACCG ACAACAGCAA 
CTGCGGCGGG AAAACTCCCG GCAACTGATC CAGTTCAGTA GCGTGGATTA TACGGGGATG 
CTTACGGTCA CCGATCCCGG GTTATTTCTG CAACGTCTCA GTCAGGGGTA TGGCAAAAGC 
CGCGCGTTCG GCTGTGGTCT GATGCTGATC AAACCCGGAG CAGAGGCGTG A
 
Protein sequence
MYLSRITLHT GQLSPAQLLH LVDRGEYVMH QWLWDLFPSG KERQFLYRRE ELQGAFRFFV 
LSQERPAESD TFTIECRSFA PELCTGQQLC FNLRANPTIC KAGKRHDLLM EAKRQVRGQA 
EGSDVWLHQQ QAALDWLAAQ GERSGFTLLD TSVDAYRQQQ LRRENSRQLI QFSSVDYTGM 
LTVTDPGLFL QRLSQGYGKS RAFGCGLMLI KPGAEA