| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3089 |
|---|
| Symbol | relA |
|---|
| ID | 6271300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 2886486 |
|---|
| End bp | 2888720 |
|---|
| Gene Length | 2235 bp |
|---|
| Protein Length | 744 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641727016 |
|---|
| Product | GDP/GTP pyrophosphokinase |
|---|
| Protein accession | YP_001881475 |
|---|
| Protein GI | 187731760 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000000014869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGCGG TAAGAAGTGC ACATATCAAT AAGGCTGGTG GATTTGATCC GGAAAAATGG
ATCGCAAGTC TGGGTATTAC CAGCCAGAAG TCGTGTGAGT GCTTAGCCGA AACCTGGGCG
TATTGTCTGC AGCAGACGCA GGGGCATCCG GATGCCAGTC TGTTATTGTG GCGTGGTGTT
GAGATGGTGG AGATCCTCTC GACATTAAGT ATGGACATTG ACACGCTGCG GGCGGCGCTG
CTGTTCCCTC TGGCCGATGC CAACGTAGTC AGCGAAGATG TGCTGCGTGA GAGCGTCGGT
AAGTCTGTCG TTAACCTTAT TCACGGCGTG CGTGATATGG CGGCGATCCG CCAGCTGAAA
GCGACGCACA CTGATTCTGT TTCCTCCGAA CAGGTCGATA ACGTTCGCCG GATGTTATTG
GCGATGGTCG ATGATTTTCG CTGCGTGGTC ATCAAACTGG CGGAGCGTAT TGCTCATCTG
CGCGAAGTAA AAGATGCGCC GGAAGATGAA CGCGTACTGG CGGCAAAAGA GTGCACCAAT
ATCTACGCGC CGTTGGCGAA CCGTCTTGGG ATTGGGCAAC TGAAATGGGA GCTGGAAGAT
TACTGCTTCC GTTATCTGCA CCCGACCGAA TACAAACGCA TCGCAAAACT GCTGCATGAA
CGCCGTCTCG ACCGCGAACA CTATATCGAA GAGTTTGTCA GTCATCTGCG CGCTGAGATG
AAAGCTGAAG GCGTTAAAGC TGAAGTGTAT GGCCGTCCGA AACACATCTA CAGCATCTGG
CGCAAAATGC AGAAAAAGAA CCTCGCCTTC GATGAGCTGT TTGATGTGCG TGCGGTACGT
ATTGTCGCCG AGCGTTTACA GGATTGTTAT GCCGCACTGG GGATAGTGCA CACTCACTAT
CGCCACCTGC CGGATGAGTT TGACGATTAT GTCGCTAACC CGAAACCAAA CGGTTATCAG
TCTATTCATA CCGTGGTTCT GGGGCCAGGT GGCAAAACCG TTGAGATCCA AATCCGCACC
AAACAGATGC ATGAAGATGC AGAGTTGGGT GTTGCTGCGC ACTGGAAATA TAAAGAGGGC
GCGGCAGCTG GCGGCGCACG TTCGGGACAT GAAGACCGGA TTGCCTGGCT GCGTAAACTG
ATTGCGTGGC AGGAAGAGAT GGCTGATTCC GGCGAAATGC TCGACGAAGT ACGCAGCCAG
GTCTTTGACG ACCGGGTGTA TGTCTTTACG CCGAAAGGTG ATGTCGTTGA TTTGCCTGCG
GGATCAACGC CGCTGGACTT CGCTTACCAC ATCCACAGTG ATGTCGGACA CCGCTGCATC
GGGGCAAAAA TTGGCGGGCG CATTGTGCCG TTCACCTACC AGCTGCAGAT GGGCGACCAG
ATTGAAATTA TCACCCAGAA ACAGCCGAAC CCCAGCCGTG ACTGGTTAAA CCCAAACCTC
GGTTACGTCA CAACCAGCCG TGGGCGTTCG AAAATTCACG CCTGGTTCCG TAAACAGGAC
CGTGACAAAA ACATTCTGGC TGGGCGGCAA ATCCTTGACG ACGAGCTGGA ACATCTGGGG
ATCAGCCTGA AAGAAGCAGA AAAACATCTG CTGCCGCGTT ACAACTTTAA TGATGTCGAC
GAGTTGCTGG CGGCGATTGG TGGCGGGGAT ATCCGTCTCA ATCAGATGGT GAACTTCCTG
CAATCGCAAT TTAATAAGCC GAGTGCCGAA GAGCAGGACG CCGCCGCGCT GAAGCAACTT
CAGCAAAAAA GCTACACGCC GCAAAACCGC AGTAAAGATA ACGGTCGCGT GGTAGTCGAA
GGTGTTGGCA ACCTGATGCA CCACATCGCG CGCTGCTGCC AGCCGATTCC TGGAGATGAG
ATTGTCGGCT TCATTACCCA GGGGCGCGGT ATTTCAGTAC ACCGCGCCGA TTGCGAACAA
CTGGCGGAAC TGCGCTCTCA TGCGCCAGAA CGCATTGTTG ACGCGGTATG GGGTGAGAGC
TACTCCGCCG GATATTCGCT GGTGGTCCGC GTGGTGGCTA ATGATCGTAG TGGGTTGTTA
CGTGATATCA CGACCATTCT CGCCAACGAG AAGGTGAACG TACTTGGCGT TGCCAGCCGT
AGCGACACCA AACAGCAACT GGCGACCATC GACATGACCA TTGAGATTTA CAACCTGCAG
GTGCTGGGCC GCGTGCTGGG TAAACTCAAC CAGGTGCCGG ATGTTATCGA CGCGCGTCGG
TTGCACGGGA GTTAG
|
|---|
| Protein sequence | MVAVRSAHIN KAGGFDPEKW IASLGITSQK SCECLAETWA YCLQQTQGHP DASLLLWRGV
EMVEILSTLS MDIDTLRAAL LFPLADANVV SEDVLRESVG KSVVNLIHGV RDMAAIRQLK
ATHTDSVSSE QVDNVRRMLL AMVDDFRCVV IKLAERIAHL REVKDAPEDE RVLAAKECTN
IYAPLANRLG IGQLKWELED YCFRYLHPTE YKRIAKLLHE RRLDREHYIE EFVSHLRAEM
KAEGVKAEVY GRPKHIYSIW RKMQKKNLAF DELFDVRAVR IVAERLQDCY AALGIVHTHY
RHLPDEFDDY VANPKPNGYQ SIHTVVLGPG GKTVEIQIRT KQMHEDAELG VAAHWKYKEG
AAAGGARSGH EDRIAWLRKL IAWQEEMADS GEMLDEVRSQ VFDDRVYVFT PKGDVVDLPA
GSTPLDFAYH IHSDVGHRCI GAKIGGRIVP FTYQLQMGDQ IEIITQKQPN PSRDWLNPNL
GYVTTSRGRS KIHAWFRKQD RDKNILAGRQ ILDDELEHLG ISLKEAEKHL LPRYNFNDVD
ELLAAIGGGD IRLNQMVNFL QSQFNKPSAE EQDAAALKQL QQKSYTPQNR SKDNGRVVVE
GVGNLMHHIA RCCQPIPGDE IVGFITQGRG ISVHRADCEQ LAELRSHAPE RIVDAVWGES
YSAGYSLVVR VVANDRSGLL RDITTILANE KVNVLGVASR SDTKQQLATI DMTIEIYNLQ
VLGRVLGKLN QVPDVIDARR LHGS
|
|---|
| |