Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3087 |
Symbol | barA |
ID | 6268755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2882324 |
End bp | 2885080 |
Gene Length | 2757 bp |
Protein Length | 918 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641727014 |
Product | hybrid sensory histidine kinase BarA |
Protein accession | YP_001881473 |
Protein GI | 187732711 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4999] Uncharacterized domain of BarA-like signal transduction histidine kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000144797 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAACT ACAGCCTGCG CGCACGCATG ATGATTCTGA TCCTGGCACC GACCGTCCTT ATTGGTTTAT TGCTGAGTAT CTTTTTCGTC GTGCATCGCT ATAACGACTT GCAGCGTCAA CTGGAAGATG CCGGTGCCAG CATTATTGAG CCGCTTGCAG TTTCTACTGA ATATGGCATG AGCCTGCAAA ATCGCGAATC TATCGGTCAG TTAATAAGCG TACTGCATCG TCGCCATTCC GATATTGTTC GCGCGATTTC GGTTTATGAT GAAAATAACC GACTCTTTGT CACCTCCAAT TTTCATCTTG ATCCCTCATC AATGCAGCTC GGCAGCAACG TGCCGTTTCC TCGCCAGCTC ACTGTCACTC GTGACGGCGA TATTATGATC CTCCGCACGC CGATTATTTC TGAGAGTTAC TCCCCCGACG AATCGCCCAG TAGCGATGCC AAAAATAGTC AAAATATGTT GGGATATATT GCGCTTGAGC TGGATCTTAA ATCGGTTCGC TTGCAGCAAT ATAAAGAGAT CTTTATTTCC AGCGTGATGA TGCTGTTTTG TATCGGTATT GCGCTTATTT TTGGCTGGCG CTTAATGCGC GATGTAACCG GTCCGATTCG CAACATGGTG AATACCGTCG ACCGCATCCG TCGCGGGCAA CTCGACAGCC GGGTGGAAGG ATTTATGCTC GGCGAGCTGG ATATGCTGAA AAACGGTATC AACTCGATGG CAATGTCGCT GGCTGCTTAT CACGAAGAGA TGCAGCACAA TATCGACCAG GCGACGTCCG ATCTGCGTGA AACGCTGGAG CAGATGGAAA TTCAGAACGT TGAGTTGGAT CTGGCGAAAA AGCGCGCCCA GGAAGCGGCG CGTATTAAAT CCGAGTTTCT GGCAAATATG TCACACGAGC TGCGTACACC ACTGAATGGT GTTATTGGCT TTACCCGCCT GACGCTGAAA ACAGAATTAA CACCAACGCA GCGCGATCAC CTGAATACGA TTGAACGTTC GGCAAATAAT TTGCTGGCAA TTATTAATGA TGTTCTCGAC TTCTCGAAAC TGGAAGCAGG TAAGCTGATT CTGGAAAGTA TTCCATTCCC ACTACGCAGC ACGCTGGATG AAGTCGTTAC TCTGCTGGCA CATTCTTCTC ACGATAAAGG GTTGGAACTG ACGCTCAATA TTAAAAGCGA CGTGCCTGAT AACGTGATCG GCGACCCACT GCGATTACAG CAAATCATCA CTAACCTGGT GGGGAATGCA ATTAAATTCA CCGAGAATGG CAACATTGAT ATTCTGGTAG AAAAACGTGC GCTGAGTAAT ACCAAAGTGC AGATTGAAGT GCAGATTCGG GATACCGGCA TTGGTATTCC TGAACGCGAT CAATCGCGCT TATTCCAGGC CTTCCGACAG GCTGATGCCA GTATTTCCCG CCGTCATGGT GGCACCGGGC TGGGGCTGGT GATTACACAA AAACTGGTTA ATGAAATGGG CGGCGATATT TCGTTCCATA GCCAGCCGAA TCGCGGTTCA ACTTTCTGGT TCCACATTAA TCTCGATCTG AACCCGAACA TTATTATCGA AGGGCCATCC ACCCAGTGCC TCGCAGGTAA GCGCCTGGCC TATGTCGAAC CAAACTCCGC AGCAGCGCAA TGCACGCTGG ATATTTTAAG TGAAACGCCG CTGGAAGTGG TTTATAGCCC AACGTTCTCC GCGCTGCCTC CCGCGCATTA CGACATGATG TTGTTAGGCA TCGCGGTGAC CTTCCGCGAG CCGCTAACAA TGCAACATGA GCGATTAGCG AAAGCGGTAT CGATGACCGA TTTCCTGATG CTGGCACTTC CTTGCCATGC ACAAGTCAAT GCTGAAAAAC TCAAGCAAGA TGGTATCGGC GCGTGTCTGC TGAAACCATT AACACCTACA CGCCTGTTGC CTGCCCTGAC GGAATTTTGT CATCACAAAC AAAACACGCT TTTGCCTGTA ACCGATGAAA GTAAGCTGGC AATGACAGTC ATGGCGGTTG ATGACAACCC CGCTAACCTG AAACTTATCG GCGCATTGCT GGAAGATATG GTGCAACATG TGGAACTTTG CGATAGCGGG CATCAGGCGG TTGAACGGGC GAAACAGATG CCGTTCGATT TGATCTTAAT GGATATTCAA ATGCCGGACA TGGATGGCAT TCGGGCCTGC GAACTCATCC ACCAGCTCCC CCATCAGCAA CAAACGCCGG TTATCGCGGT AACGGCGCAT GCAATGGCCG GGCAAAAAGA GAAGCTGCTT GGCGCAGGGA TGAGCGATTA TCTGGCGAAA CCGATTGAAG AAGAGCGATT GCATAATTTG TTGTTGCGCT ACAAGCCTGG CAGCGGTATT TCCTCTCGCG TCGTGACGCC CGAAGTCAAC GAAATTGTGG TGAACCCGAA TGCGACCCTC GACTGGCAAC TGGCACTACG GCAGGCAGCA GGAAAAACCG ATTTAGCGCG CGATATGCTG CAAATGTTAC TCGATTTCCT GCCTGAAGTT CGCAACAAAG TTGAGGAACA GCTGGTTGGA GAAAACCCGG AAGGCCTGGT TGATTTGATT CATAAACTGC ATGGCAGTTG CGGCTATAGC GGTGTGCCGC GTATGAAGAA TCTCTGCCAA CTGATCGAAC AACAGCTACG TAGCGGTACT AAAGAAGAAG ATTTGGAGCC GGAGCTGCTG GAACTGTTGG ACGAGATGGA TAATGTCGCG CGCGAAGCCA GCAAAATTCT CGGGTAA
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Protein sequence | MTNYSLRARM MILILAPTVL IGLLLSIFFV VHRYNDLQRQ LEDAGASIIE PLAVSTEYGM SLQNRESIGQ LISVLHRRHS DIVRAISVYD ENNRLFVTSN FHLDPSSMQL GSNVPFPRQL TVTRDGDIMI LRTPIISESY SPDESPSSDA KNSQNMLGYI ALELDLKSVR LQQYKEIFIS SVMMLFCIGI ALIFGWRLMR DVTGPIRNMV NTVDRIRRGQ LDSRVEGFML GELDMLKNGI NSMAMSLAAY HEEMQHNIDQ ATSDLRETLE QMEIQNVELD LAKKRAQEAA RIKSEFLANM SHELRTPLNG VIGFTRLTLK TELTPTQRDH LNTIERSANN LLAIINDVLD FSKLEAGKLI LESIPFPLRS TLDEVVTLLA HSSHDKGLEL TLNIKSDVPD NVIGDPLRLQ QIITNLVGNA IKFTENGNID ILVEKRALSN TKVQIEVQIR DTGIGIPERD QSRLFQAFRQ ADASISRRHG GTGLGLVITQ KLVNEMGGDI SFHSQPNRGS TFWFHINLDL NPNIIIEGPS TQCLAGKRLA YVEPNSAAAQ CTLDILSETP LEVVYSPTFS ALPPAHYDMM LLGIAVTFRE PLTMQHERLA KAVSMTDFLM LALPCHAQVN AEKLKQDGIG ACLLKPLTPT RLLPALTEFC HHKQNTLLPV TDESKLAMTV MAVDDNPANL KLIGALLEDM VQHVELCDSG HQAVERAKQM PFDLILMDIQ MPDMDGIRAC ELIHQLPHQQ QTPVIAVTAH AMAGQKEKLL GAGMSDYLAK PIEEERLHNL LLRYKPGSGI SSRVVTPEVN EIVVNPNATL DWQLALRQAA GKTDLARDML QMLLDFLPEV RNKVEEQLVG ENPEGLVDLI HKLHGSCGYS GVPRMKNLCQ LIEQQLRSGT KEEDLEPELL ELLDEMDNVA REASKILG
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