| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3086 |
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| Symbol | |
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| ID | 6271471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 2880752 |
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| End bp | 2882092 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641727013 |
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| Product | glucarate dehydratase |
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| Protein accession | YP_001881472 |
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| Protein GI | 187730357 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCTC AATTTACGAC GCCTGTTGTT ACTGAAATGC AGGTCATCCC GGTGGCGGGT
CATGACAGTA TGCTGATGAA TCTGAGTGGT GCACACGCAC CGTTCTTTAC GCGTAATATT
ATGATTATCA AAGATAATTC TGGTCACACT GGCGTAGGGG AAATTCCCGG CGGCGAGAAA
ATCCGTAAAA CGCTGGAAGA TGCGATTCCG CTGGTGGTAG GTAAAACGCT GGGTGAATAC
AAAAACGTTC TGACGCTGGT GCGTAATACT TTTGCCGATC GTGATGCTGG TGGGCGCGGT
TTGCAGACAT TTGATTTGCG TACCACTATT CATGTAGTTA CCGGGATAGA AGCGGCAATG
CTGGATCTGC TGGGGCAGCA TCTGGGGGTA AACGTGGCAT CCCTGCTGGG CGATGGTCAA
CAGCGTAGCG AAGTCGAAAT GCTCGGTTAT CTGTTCTTCG TCGGTGATCG CAAAGCCACA
CCGCTGCCGT ATCAAAGCCA GCCGGATGAC TCATGCGACT GGTATCGCCT GCGTCATGAA
GAAGCGATGA CGCCGGATGC GGTGGTGCGC CTGGCGGAAG CGGCGTATGA AAAATATGGC
TTCAACGATT TCAAACTGAA AGGCGGTGTA CTGGCCGGGG AAGAAGAGGC CGAGTCTATT
GTGGCACTGG CGCAACGCTT CCCGCAGGCG CGTATTACGC TCGATCCTAA CGGTGCCTGG
TCGCTGAACG AAGCGATTAA AATTGGTAAA TACCTGAAAG GGTCGCTGGC TTATGCAGAA
GATCCGTGTG GTGCGGAGCA AGGTTTCTCC GGGCGTGAAG TGATGGCAGA GTTCCGTCGC
GCAACTGGCC TGCCGACCGC AACCAATATG ATCGCCACCG ACTGGCGGCA GATGGGCCAT
ACGCTCTCCC TGCAATCCGT TGATATCCCG CTGGCGGATC CGCATTTCTG GACGATGCAA
GGTTCGGTAC GTGTGGCGCA AATGTGCCAT GAATTTGGCC TGACCTGGGG TTCACACTCA
AACAACCACT TCGATATTTC CCTGGCGATG TTTACCCATG TTGCCGCCGC TGCACCGGGT
AAAATCACCG CGATTGATAC GCACTGGATT TGGCAGGAAG GCAATCAGCG CTTGACCAAA
GAACCGTTTG AGATCAAAGG CGGTCTGGTT CAGGTGCCGG AAAAACCGGG GCTGGGTGTA
GAAATCGATA TGGATCAAGT GATGAAAGCC CATGAGCTGT ATCAGAAACA CGGGCTTTGC
GCGCGTGACG ATGCGATGGG AATGCAGTAT CTGATTCCTG TCTGGACGTT CGATAACAAG
CGCCCGTGCA TGGTGCGTTA A
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| Protein sequence | MSSQFTTPVV TEMQVIPVAG HDSMLMNLSG AHAPFFTRNI MIIKDNSGHT GVGEIPGGEK
IRKTLEDAIP LVVGKTLGEY KNVLTLVRNT FADRDAGGRG LQTFDLRTTI HVVTGIEAAM
LDLLGQHLGV NVASLLGDGQ QRSEVEMLGY LFFVGDRKAT PLPYQSQPDD SCDWYRLRHE
EAMTPDAVVR LAEAAYEKYG FNDFKLKGGV LAGEEEAESI VALAQRFPQA RITLDPNGAW
SLNEAIKIGK YLKGSLAYAE DPCGAEQGFS GREVMAEFRR ATGLPTATNM IATDWRQMGH
TLSLQSVDIP LADPHFWTMQ GSVRVAQMCH EFGLTWGSHS NNHFDISLAM FTHVAAAAPG
KITAIDTHWI WQEGNQRLTK EPFEIKGGLV QVPEKPGLGV EIDMDQVMKA HELYQKHGLC
ARDDAMGMQY LIPVWTFDNK RPCMVR
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