| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3084 |
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| Symbol | gudP |
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| ID | 6272488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 2878067 |
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| End bp | 2879389 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641727012 |
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| Product | glucarate permease |
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| Protein accession | YP_001881471 |
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| Protein GI | 187732806 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.567935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAAAAC GCACGAATGC TCGTTACTGG ATAGTGGTGA TGTTGTTTAT CGTCACATCC
TTCAACTACG GCGACCGCGC TACGCTTTCT ATTGCCGGTT CGGAAATGGC CAAAGATATC
GGCCTTGATC CCGTGGGAAT GGGCTATGTG TTCTCTGCCT TCTCATGGGC TTATGTTATC
GGGCAGATCC CTGGTGGTTG GTTGCTGGAT CGTTTTGGTT CAAAACGCGT CTACTTCTGG
TCGATCTTTA TCTGGTCGAT GTTTACCTTG CTGCAAGGCT TCGTCGATAT CTTTAGTGGA
TTCGGCATTA TCGTTGCCCT GTTTACTCTG CGCTTCCTGG TCGGGCTTGC TGAAGCGCCA
TCTTTCCCCG GCAACAGTCG CATTGTTGCG GCCTGGTTTC CGGCGCAGGA AAGGGGAACG
GCGGTGTCGA TTTTTAACTC CGCTCAATAC TTCGCAACGG TGATCTTCGC GCCGATTATG
GGCTGGCTGA CGCATGAAGT GGGCTGGTCA CACGTCTTCT TCTTTATGGG CGGTCTGGGG
ATTGTCATCA GCTTTATCTG GTTGAAAGTC ATCCACGAGC CAAATCAACA TCCGGGGGTA
AATCAGAAAG AGCTGGAGTA CATCGCCGCG GGTGGCGCGC TGATCAATAT GGATCAGCAA
AACACCAAAG TTAAAGTGCC GTTCAGCGTG AAGTGGGGGC AGATCAAACA ACTGCTCGGG
TCACGGATGA TGATCGGCGT TTATATCGGT CAGTACTGTA TCAACGCCCT GACTTACTTT
TTCATTACCT GGTTTCCGGT TTATCTGGTG CAGGCGCGTG GGATGTCGAT TCTGAAAGCG
GGCTTTGTGG CTTCCGTTCC GGCGGTTTGC GGTTTTATCG GCGGTGTGCT GGGTGGGATT
ATTTCCGACT GGCTGATGCG CCGCACGGGA TCGCTGAACA TTGCGCGTAA AACACCGATC
GTAATGGGCA TGTTGCTGTC GATGGTGATG GTGTTCTGCA ACTACGTCAA CGTTGAGTGG
ATGATCATCG GCTTTATGGC GCTGGCCTTC TTCGGTAAGG GCATCGGGGC GCTGGGTTGG
GCAGTAATGG CAGATACCGC GCCAAAAGAG ATCAGCGGTC TTTCCGGTGG CCTGTTCAAC
ATGTTCGGTA ACATTTCTGG CATCGTCACG CCAATCGCAA TTGGTTATAT CGTTGGCACG
ACTGGCTCCT TTAATGGGGC GCTGATTTAT GTTGGTGTTC ATGCCTTAAT CGCGGTACTG
AGCTACCTGG TGCTGGTGGG CGATATCAAG CGTATCGAGC TGAAACCTGT CGCGGGGCAA
TAA
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| Protein sequence | MEKRTNARYW IVVMLFIVTS FNYGDRATLS IAGSEMAKDI GLDPVGMGYV FSAFSWAYVI
GQIPGGWLLD RFGSKRVYFW SIFIWSMFTL LQGFVDIFSG FGIIVALFTL RFLVGLAEAP
SFPGNSRIVA AWFPAQERGT AVSIFNSAQY FATVIFAPIM GWLTHEVGWS HVFFFMGGLG
IVISFIWLKV IHEPNQHPGV NQKELEYIAA GGALINMDQQ NTKVKVPFSV KWGQIKQLLG
SRMMIGVYIG QYCINALTYF FITWFPVYLV QARGMSILKA GFVASVPAVC GFIGGVLGGI
ISDWLMRRTG SLNIARKTPI VMGMLLSMVM VFCNYVNVEW MIIGFMALAF FGKGIGALGW
AVMADTAPKE ISGLSGGLFN MFGNISGIVT PIAIGYIVGT TGSFNGALIY VGVHALIAVL
SYLVLVGDIK RIELKPVAGQ
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