Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3076 |
Symbol | |
ID | 6269753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2870619 |
End bp | 2871908 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641727003 |
Product | serine transporter family protein |
Protein accession | YP_001881463 |
Protein GI | 187733396 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.119779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACGA CTCAAACCAG CACGATTGCG TCGAAAGACT CTCGTAGTGC CTGGCGCAAG ACAGACACCA TGTGGATGCT GGGCCTTTAC GGCACGGCAA TCGGCGCGGG CGTGCTGTTC CTGCCAATCA ACGCCGGTGT TGGCGGTATG ATCCCGCTGA TCATCATGGC TATCCTTGCG TTCCCGATGA CGTTTTTTGC TCACCGCGGC CTGACTCGCT TCGTACTGTC TGGTAAAAAC CCGGGCGAAG ACATCACCGA GGTTGTAGAA GAACACTTTG GTATTGGCGC AGGTAAACTG ATTACCCTGC TCTACTTCTT CGCTATCTAC CCGATCCTGC TGGTTTATAG CGTGGCAATC ACCAATACAG TTGAAAGCTT CATGTCTCAC CAGCTGGGTA TGACGCCACC GCCGCGTGCG ATTCTGTCGC TGATCCTGAT CGTGGGTATG ATGACCATCG TTCGCTTCGG TGAGCAGATG ATCGTTAAAG CGATGAGTAT TCTGGTGTTC CCGTTTGTTG GCGTATTGAT GCTGCTGGCT CTGTACCTGA TCCCGCAGTG GAACGGCGCA GCACTGGAAA CGCTGTCTCT GGACACTGCA TCTGCAACCG GAAACGGTCT GTGGATGACC CTGTGGCTGG CAATTCCGGT AATGGTGTTC TCGTTCAACC ACTCTCCGAT CATCTCTTCT TTCGCCGTTG CGAAGCGTGA AGAGTACGGC GATATGGCAG AACAGAAATG CTCGAAGATC CTGGCATTCG CACACATCAT GATGGTGCTG ACCGTAATGT TCTTCGTCTT CAGCTGTGTA CTGAGCCTGA CTCCGGCAGA CCTGGCTGCG GCTAAAGAGC AGAACATCTC GATTCTGTCT TACCTGGCTA ACCACTTTAA CGTACCGGTT ATCGCGTGGA TGGCTCCGAT TATCGCGATT ATCGCTATCA CCAAATCCTT CCTCGGCCAC TACCTGGGCG CACGTGAAGG CTTCAACGGT ATGGTGATTA AATCTCTGCG TGGTAAAGGT AAGTCTATCG AAATCAACAA GCTGAACCGT ATCACTGCGC TGTTCATGCT GGTAACGACC TGGATTGTTG CCACCCTGAA CCCGAGCATC CTGGGTATGA TTGAAACCCT GGGCGGTCCA ATCATCGCGA TGATCCTGTT CCTGATGCCG ATGTACGCAA TTCAGAAAGT ACCGGCAATG CGTAAGTACA GCGGTCACAT CAGCAACGTA TTCGTTGTCG TGATGGGTCT GATTGCAATC TCCGCAATCT TCTACTCTCT GTTCAGCTAA
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Protein sequence | METTQTSTIA SKDSRSAWRK TDTMWMLGLY GTAIGAGVLF LPINAGVGGM IPLIIMAILA FPMTFFAHRG LTRFVLSGKN PGEDITEVVE EHFGIGAGKL ITLLYFFAIY PILLVYSVAI TNTVESFMSH QLGMTPPPRA ILSLILIVGM MTIVRFGEQM IVKAMSILVF PFVGVLMLLA LYLIPQWNGA ALETLSLDTA SATGNGLWMT LWLAIPVMVF SFNHSPIISS FAVAKREEYG DMAEQKCSKI LAFAHIMMVL TVMFFVFSCV LSLTPADLAA AKEQNISILS YLANHFNVPV IAWMAPIIAI IAITKSFLGH YLGAREGFNG MVIKSLRGKG KSIEINKLNR ITALFMLVTT WIVATLNPSI LGMIETLGGP IIAMILFLMP MYAIQKVPAM RKYSGHISNV FVVVMGLIAI SAIFYSLFS
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