Gene SbBS512_E3076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3076 
Symbol 
ID6269753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2870619 
End bp2871908 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content52% 
IMG OID641727003 
Productserine transporter family protein 
Protein accessionYP_001881463 
Protein GI187733396 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00814] serine transporter 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.119779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACGA CTCAAACCAG CACGATTGCG TCGAAAGACT CTCGTAGTGC CTGGCGCAAG 
ACAGACACCA TGTGGATGCT GGGCCTTTAC GGCACGGCAA TCGGCGCGGG CGTGCTGTTC
CTGCCAATCA ACGCCGGTGT TGGCGGTATG ATCCCGCTGA TCATCATGGC TATCCTTGCG
TTCCCGATGA CGTTTTTTGC TCACCGCGGC CTGACTCGCT TCGTACTGTC TGGTAAAAAC
CCGGGCGAAG ACATCACCGA GGTTGTAGAA GAACACTTTG GTATTGGCGC AGGTAAACTG
ATTACCCTGC TCTACTTCTT CGCTATCTAC CCGATCCTGC TGGTTTATAG CGTGGCAATC
ACCAATACAG TTGAAAGCTT CATGTCTCAC CAGCTGGGTA TGACGCCACC GCCGCGTGCG
ATTCTGTCGC TGATCCTGAT CGTGGGTATG ATGACCATCG TTCGCTTCGG TGAGCAGATG
ATCGTTAAAG CGATGAGTAT TCTGGTGTTC CCGTTTGTTG GCGTATTGAT GCTGCTGGCT
CTGTACCTGA TCCCGCAGTG GAACGGCGCA GCACTGGAAA CGCTGTCTCT GGACACTGCA
TCTGCAACCG GAAACGGTCT GTGGATGACC CTGTGGCTGG CAATTCCGGT AATGGTGTTC
TCGTTCAACC ACTCTCCGAT CATCTCTTCT TTCGCCGTTG CGAAGCGTGA AGAGTACGGC
GATATGGCAG AACAGAAATG CTCGAAGATC CTGGCATTCG CACACATCAT GATGGTGCTG
ACCGTAATGT TCTTCGTCTT CAGCTGTGTA CTGAGCCTGA CTCCGGCAGA CCTGGCTGCG
GCTAAAGAGC AGAACATCTC GATTCTGTCT TACCTGGCTA ACCACTTTAA CGTACCGGTT
ATCGCGTGGA TGGCTCCGAT TATCGCGATT ATCGCTATCA CCAAATCCTT CCTCGGCCAC
TACCTGGGCG CACGTGAAGG CTTCAACGGT ATGGTGATTA AATCTCTGCG TGGTAAAGGT
AAGTCTATCG AAATCAACAA GCTGAACCGT ATCACTGCGC TGTTCATGCT GGTAACGACC
TGGATTGTTG CCACCCTGAA CCCGAGCATC CTGGGTATGA TTGAAACCCT GGGCGGTCCA
ATCATCGCGA TGATCCTGTT CCTGATGCCG ATGTACGCAA TTCAGAAAGT ACCGGCAATG
CGTAAGTACA GCGGTCACAT CAGCAACGTA TTCGTTGTCG TGATGGGTCT GATTGCAATC
TCCGCAATCT TCTACTCTCT GTTCAGCTAA
 
Protein sequence
METTQTSTIA SKDSRSAWRK TDTMWMLGLY GTAIGAGVLF LPINAGVGGM IPLIIMAILA 
FPMTFFAHRG LTRFVLSGKN PGEDITEVVE EHFGIGAGKL ITLLYFFAIY PILLVYSVAI
TNTVESFMSH QLGMTPPPRA ILSLILIVGM MTIVRFGEQM IVKAMSILVF PFVGVLMLLA
LYLIPQWNGA ALETLSLDTA SATGNGLWMT LWLAIPVMVF SFNHSPIISS FAVAKREEYG
DMAEQKCSKI LAFAHIMMVL TVMFFVFSCV LSLTPADLAA AKEQNISILS YLANHFNVPV
IAWMAPIIAI IAITKSFLGH YLGAREGFNG MVIKSLRGKG KSIEINKLNR ITALFMLVTT
WIVATLNPSI LGMIETLGGP IIAMILFLMP MYAIQKVPAM RKYSGHISNV FVVVMGLIAI
SAIFYSLFS