| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3042 |
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| Symbol | recB |
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| ID | 6269587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 2842436 |
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| End bp | 2845978 |
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| Gene Length | 3543 bp |
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| Protein Length | 1180 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641726975 |
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| Product | exonuclease V subunit beta |
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| Protein accession | YP_001881439 |
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| Protein GI | 187733096 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATG TCGCCGAGAC ACTAGATCCT TTGCGCTTGC CCTTACAGGG TGAGCGCCTG
ATTGAAGCCT CTGCCGGCAC AGGCAAAACC TTTACGATTG CGGCGCTCTA TTTGCGCCTG
TTACTTGGAC TAGGCGGTTC CGCCGCCTTT CCCCGCCCGC TGACCGTTGA AGAACTGCTG
GTGGTCACCT TTACCGAGGC TGCCACGGCA GAATTGCGTG GTCGTATCCG TAGCAATATC
CATGAGTTGC GCATCGCCTG TCTGCGTGAA ACTACCGACA ATCCACTGTA CGAACGTCTG
CTGGAAGAGA TCGACGATAA AGCGCAAGCC GCGCAGTGGT TGTTGTTAGC CGAACGGCAG
ATGGATGAAG CGGCAGTCTT TACTATTCAC GGTTTTTGCC AGCGCATGCT CAACCTGAAT
GCCTTTGAAT CCGGCATGCT GTTTGAGCAG CAGCTGATTG AAGATGAGTC TCTGCTACGT
TACCAGGCCT GCGCCGATTT CTGGCGTCGC CACTGCTACC CGCTGCCGCG TGAAATAGCC
CAGGTCGTCT TTGAAACCTG GAAAGGGCCG CAGGCGTTGC TGCGCGATAT TAATCGTTAT
CTGCAAGGCG AAGCGCCGGT TATCAAAGCA CCGCCGCCCG ATGATGAAAC GCTGGCTTCC
CGCCACGCGC AAATTGTGGC GCGTATTGCT ACGGTAAAAC AGCAGTGGCG CGACGCAGTG
GGTGAACTGG ATGCGCTGAT CGAATCTTCT GGTATTGATC GACGCAAGTT TAACCGTAGC
AATCAGGCTA AATGGATCGA CAAGATCAGC GCCTGGGCAG AAGAAGAGAC CAACAGTTAT
CAGTTGCCGG AGTCGCTGGA AAAATTCTCC CAGCGTTTCT TAGAAGATCG CACGAAAGCC
GGGGGGGAAA CCCCGCGACA TCCACTGTTT GAGGCGATCG ATCAACTGCT TGCAGAACCA
TTGTCGATCC GCGATCTGGT GATCACCCGC GCATTGGCTG AGATCCGCGA AACAGTAGCG
CGTGAAAAAC GCCGCCGTGG CGAATTGGGT TTTGATGACA TGTTAAGTCG GCTCGATTCC
GCGCTGCGTA GCGAAAGCGG TGAGGTGTTG GCAGCGGCGA TCCGTACGCG ATTCCCGGTG
GCAATGATCG ATGAATTTCA GGATACCGAC CCCCAGCAGT ACCGAATTTT TCGCCGTATC
TGGCACCATC AGCCGGAAAC CGCATTGTTG CTGATTGGCG ACCCGAAGCA GGCCATATAT
GCATTCCGGG GTGCGGATAT CTTCACTTAT ATGAAGGCGC GTAGTGAAGT TCACGCCCAC
TACACTTTAG ACACCAACTG GCGCTCCGCA CCTGGAATGG TGAACAGTGT GAACAAGCTT
TTCAGCCAGA CTGATGACGC GTTCATGTTT CGCGAAATAC CGTTTATTCC AGTGAAATCA
GCCGGGAAAA ATCAGGCGTT ACGTTTTGTA TTTAAAGGTG AAACGCAGCC TGCGATGAAA
ATGTGGCTGA TGGAAGGCGA AAGCTGCGGC GTTGGCGACT ATCAAAGTAC CATGGCGCAG
GTATGTGCTG CGCAAATCCG CGACTGGCTA CAAGCCGGAC AGCGGGGCGA AGCGTTGCTG
ATGAACGGCG ACGACGCGCG TCCGGTGCGT GCTTCGGACA TCAGTGTGCT GGTGCGCAGC
CGCCAGGAGG CCGCCCAGGT GCGCGATGCC TTAACGTTGC TGGAAATCCC TTCCGTTTAC
CTTTCGAACC GCGACAGTGT TTTTGAAACT CTGGAAGCGC AGGAAATGCT TTGGTTATTG
CAGGCGGTGA TGACGCCCGA ACGTGAGAAC ACCCTGCGTA GTGCGCTGGC AACGTCAATG
ATGGGGCTGA ACGCGCTGGA TATCGAAACG CTGAATAATG ACGAACATGC GTGGGATGCG
GTAGTTGAAG AGTTCGATGG TTATCGGCAA ATCTGGCGCA AACGTGGCGT TATGCCGATG
CTGCGGGCGC TGATGTCGGC GCGTAACATT GCAGAAAACT TGCTGGCAAC GGCAGGCGGT
GAGCGGCGTC TTACCGATAT CTTGCATATC AGCGAACTGC TACAAGAAGC CGGAACGCAG
CTGGAAAGTG AACATGCGCT GGTACGCTGG TTATCGCAAC ATATCCTCGA GCCAGACAGT
AATGCCTCCA GCCAACAAAT GCGCCTCGAA AGTGATAAAC ATCTGGTGCA GATTGTCACG
ATCCATAAAT CGAAAGGGCT GGAATATCCG CTGGTCTGGT TGCCATTTAT TACCAATTTC
CGCGTCCAGG ATCAGGCGTT TTATCACGAT CGCCACTCGT TTGAGGCAGT TTTGGATCTT
AATGCTGCGC CAAAAAGCGT CGACCTCGCG GAGGTCGAAC GTCTGGCGGA AGATCTGCGT
TTGCTTTACG TGGCGCTAAC GCGTTCGGTT TGGCATTGCA GTCTCGGCGT TGCACCGCTG
GTGCGCCGTC GTGGCGATAA AAAAGGTGAC ACCGACGTCC ACCAAAGTGC GCTCGGGCGT
TTGCTGCAAA AAGGGGAACC GCAAGATGCG GCAGGGCTTC GCACCTGTAT TGAAGCGTTA
TGCGATGATG ATATTGCCTG GCAAACGGCA CAAACTGGTG ATAACCAGCC CTGGCAGGTT
AATGATGCTT TAACTGCAGA ACTGAATGCG AGGACACTAC AACGATTGCC CGGCGATAAC
TGGCGTGTCA CCAGCTACTC CGGCTTGCAG CAGCGTGGTC ACGGTATCGC TCAGGATCTG
ATGCCACGGC TGGATGTTGA TGCCGCAGGC GTGGTCAGCG TCGTTGAAGA ACCGACGTTA
ACACCGCATC AGTTCCCGCG CGGTGCGTCA CCGGGGACAT TCTTGCACAG TTTGTTTGAA
GACCTCGATT TTACCCAGCC GGTTGACCCG AACTGGGTAC AGGAAAAACT GGAACTCGGC
GGCTTTGAAT CGCAGTGGGA ACCGATGTTG ACCGAGTGGA TCACGGCTGT CCTCCAGGCA
CCTCTCAATG AAAAGGGTGT TAGCCTGAGT CAGCTTTCCG ACCGCGATAA ACAGGTGGAG
ATGGAGTTTT ACCTGCCGAT TAGCGAACCG CTCATCGCCA GCCAGCTTGA TGCACTAATT
CGCCAGTTTG ACCCGCTATC CGCTGGCTGC CCGCCGCTGG AGTTCATGCA GGTACGCGGC
ATGTTAAAAG GCTTTATCGA CCTAGTATTC CGCCACGAAG GGCGTTATTA CCTGCTCGAC
TATAAATCCA ACTGGCTGGG TGAAGACAGT TCGGTTTACA CCCAACAGGC TATGGCAGCA
GCGATGCAGG CACACCGCTA TGATCTGCAA TATCAGCTTT ATACCCTGGC GCTGCATCGT
TATCTGCGCC ATCGCATTGC TGATTACGAC TATGATCGTC ACTTTGGCGG CGTTATCTAT
CTGTTCCTGC GTGGCGTTGA TAAAGAACAT CCGCAACAAG GGATTTACAC AACCCGACCC
AACGCCGGGT TGATTGCCCT GATGGATGAG ATGTTTGCCG GTATGACCCT GGAGGAGGCG
TAA
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| Protein sequence | MSDVAETLDP LRLPLQGERL IEASAGTGKT FTIAALYLRL LLGLGGSAAF PRPLTVEELL
VVTFTEAATA ELRGRIRSNI HELRIACLRE TTDNPLYERL LEEIDDKAQA AQWLLLAERQ
MDEAAVFTIH GFCQRMLNLN AFESGMLFEQ QLIEDESLLR YQACADFWRR HCYPLPREIA
QVVFETWKGP QALLRDINRY LQGEAPVIKA PPPDDETLAS RHAQIVARIA TVKQQWRDAV
GELDALIESS GIDRRKFNRS NQAKWIDKIS AWAEEETNSY QLPESLEKFS QRFLEDRTKA
GGETPRHPLF EAIDQLLAEP LSIRDLVITR ALAEIRETVA REKRRRGELG FDDMLSRLDS
ALRSESGEVL AAAIRTRFPV AMIDEFQDTD PQQYRIFRRI WHHQPETALL LIGDPKQAIY
AFRGADIFTY MKARSEVHAH YTLDTNWRSA PGMVNSVNKL FSQTDDAFMF REIPFIPVKS
AGKNQALRFV FKGETQPAMK MWLMEGESCG VGDYQSTMAQ VCAAQIRDWL QAGQRGEALL
MNGDDARPVR ASDISVLVRS RQEAAQVRDA LTLLEIPSVY LSNRDSVFET LEAQEMLWLL
QAVMTPEREN TLRSALATSM MGLNALDIET LNNDEHAWDA VVEEFDGYRQ IWRKRGVMPM
LRALMSARNI AENLLATAGG ERRLTDILHI SELLQEAGTQ LESEHALVRW LSQHILEPDS
NASSQQMRLE SDKHLVQIVT IHKSKGLEYP LVWLPFITNF RVQDQAFYHD RHSFEAVLDL
NAAPKSVDLA EVERLAEDLR LLYVALTRSV WHCSLGVAPL VRRRGDKKGD TDVHQSALGR
LLQKGEPQDA AGLRTCIEAL CDDDIAWQTA QTGDNQPWQV NDALTAELNA RTLQRLPGDN
WRVTSYSGLQ QRGHGIAQDL MPRLDVDAAG VVSVVEEPTL TPHQFPRGAS PGTFLHSLFE
DLDFTQPVDP NWVQEKLELG GFESQWEPML TEWITAVLQA PLNEKGVSLS QLSDRDKQVE
MEFYLPISEP LIASQLDALI RQFDPLSAGC PPLEFMQVRG MLKGFIDLVF RHEGRYYLLD
YKSNWLGEDS SVYTQQAMAA AMQAHRYDLQ YQLYTLALHR YLRHRIADYD YDRHFGGVIY
LFLRGVDKEH PQQGIYTTRP NAGLIALMDE MFAGMTLEEA
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