| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3024 |
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| Symbol | lysA |
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| ID | 6272046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 2819735 |
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| End bp | 2820997 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641726956 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001881421 |
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| Protein GI | 187733218 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACATT CACTGTTCAG CACCGATACC GATCTCACCG CCGAAAATCT GCTGCGTTTG
CCCGCTGAAT TTGGCTGCCC GGTGTGGGTC TACGATGCGC AAATTATTCG TCGGCAGATT
GCAGCGCTGA AACAGTTTGA TGTGGTGCGC TTTGCACAGA AAGCCTGTTC CAATATTCAT
ATTTTGCGCT TAATGCGTGA GCAGGGCGTG AAAGTGGATT CCGTCTCGTT AGGCGAAATA
GAGCGTGCGT TGGCGGCGGG TTACAATCCG CAAACGCACC CCGATGATAT TGTTTTTACG
GCAGATGTTA TCGATCAGGC GACGCTTGAA CGCGTCAGTG AATTGCAAAT TCCGGTGAAT
GCGGGTTCTG TTGATATGCT CGACCAACTG GGCCAGGTTT CGCCAGGGCA TCGGGTATGG
CTGCGCGTTA ATCCGGGGTT TGGTCACGGA CATAGCCAAA AAACCAATAC CGGTGGCGAA
AACAGCAAGC ACGGTATCTG GTACACCGAT CTGCCCGCCG CACTGGACGT GATACAACGT
CATCATCTGC AGCTGGTCGG CATTCACATG CACATTGGTT CTGGCGTTGA TTATGCCCAT
CTGGAACAGG TGTGTGGTGC TATGGTGCGT CAGGTCATCG AATTCGGTCA GGATTTACAG
GCTATTTCTG CGGGCGGTGG GCTTTCTGTT CCTTATCAAC AGGGTGAAGA GGCGGTTGAT
ACCGAACATT ATTATGGTCT GTGGAATGCC GCGCGTGAGC AAATCGCCCG CCATTTGGGC
CACCCTGTGA AACTGGAAAT TGAACCGGGT CGCTTCCTGG TAGCGCAGTC TGGCGTATTA
ATTACTCAGG TGCGGAGCGT CAAACAAATG GGGAGCCGCC ACTTTGTGCT GGTTGATGCC
GGGTTCAACG ATCTGATGCG CCCGGCAATG TACGGTAGTT ACCACCATAT CAGTGCCCTG
GCAGCTGATG GTCGTTCTCT GGAACACGCG CCAACGGTGG AAACCGTCGT CGCCGGACCG
TTATGTGAAT CGGGCGATGT CTTTACCCAG CAGGAAGGGG GAAATGTTGA AACCCGCGCC
TTGCCGGAAG TGAAGGCAGG TGATTATCTG GTACTGCATG ATACAGGGGC ATATGGCGCA
TCAATGTCAT CCAACTACAA TAGCCGTTCG CTGTTACCAG AAGTTCTGTT TGATAATGGT
CAGGCGCGGT TGATTCGCCG TCGCCAGACC ATCGAAGAAT TACTGGCTCT GGAATTGCTT
TAA
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| Protein sequence | MPHSLFSTDT DLTAENLLRL PAEFGCPVWV YDAQIIRRQI AALKQFDVVR FAQKACSNIH
ILRLMREQGV KVDSVSLGEI ERALAAGYNP QTHPDDIVFT ADVIDQATLE RVSELQIPVN
AGSVDMLDQL GQVSPGHRVW LRVNPGFGHG HSQKTNTGGE NSKHGIWYTD LPAALDVIQR
HHLQLVGIHM HIGSGVDYAH LEQVCGAMVR QVIEFGQDLQ AISAGGGLSV PYQQGEEAVD
TEHYYGLWNA AREQIARHLG HPVKLEIEPG RFLVAQSGVL ITQVRSVKQM GSRHFVLVDA
GFNDLMRPAM YGSYHHISAL AADGRSLEHA PTVETVVAGP LCESGDVFTQ QEGGNVETRA
LPEVKAGDYL VLHDTGAYGA SMSSNYNSRS LLPEVLFDNG QARLIRRRQT IEELLALELL
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