Gene SbBS512_E3015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3015 
Symbol 
ID6270486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2810318 
End bp2811547 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content45% 
IMG OID641726948 
Productserine transporter family protein 
Protein accessionYP_001881413 
Protein GI187730121 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00814] serine transporter 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAATA TTTGGTCTAA AGAAGAAACT CTGTGGAGTT TCGCGCTCTA CGGCACAGCC 
GTTGGTGCAG GCACGCTCTT CCTTCCTATT CAGTTAGGTT CGGCAGGGGC TGTGGTCCTG
TTTATTACTG CTCTGGTCGC CTGGCCTTTA ACATATTGGC CACATAAAGC TTTATGCCAG
TTCATCCTCT CATCGAAAAC ATCAGCAGGT GAAGGGATAA CGGGCGCGGT AACACACTAC
TATGGCAAGA AGATTGGTAA TCTGATTACC ACGCTGTACT TCATCGCCTT TTTTGTCGTC
GTGTTGATAT ATGCAGTGGC AATTACCAAC TCACTTACAG AACAGCTGGC AAAGCATATG
GTTATTGATC TTCGCATCCG TATGTTGGTG AGTCTGGGTG TTGTATTAAT CCTGAATCTC
ATTTTTCTGA TGGGACGCCA TGCAACCATT CGGGTAATGG GTTTTTTGGT ATTCCCATTG
ATTGCCTATT TCTTATTTCT TTCCATTTAC CTTGTCGGTA GTTGGCAACC TGATCTATTA
ACGACCCAGG TAGAGTTCAA TCAGAATCCC CTTCACCAGA TATGGATATC GATTCCCGTG
ATGGTTTTCG CCTTTAGCCA TACGCCCATT ATTTCTACGT TTGCCATAGA CAGACGTGAA
AAATATGGCG AACACGCTAT GGATAAATGC AAAAAAATTA TGAAAGTCGC TTATCTCATC
ATCTGCATAA GTGTACTGTT CTTTGTCTTT AGCTGCCTGC TTTCTATTCC ACCTTCGTAT
ATTGAAGCGG CTAAAGAAGA AGGGGTCACC ATTTTATCGG CGCTTTCTAT GCTGCCGAAC
GCCCCAGCAT GGTTGTCAAT TTCCGGGATT ATTGTCGCAG TAGTTGCGAT GTCGAAATCA
TTCCTGGGTA CGTACTTTGG CGTTATTGAA GGTGCCACGG AGGTCGTCAA AACAACACTA
CAGCAGGTTG GTGTAAAGAA AAGTCGTGCA TTTAACCGCG CACTATCAAT TATGTTGGTA
TCGCTGATTA CCTTCATTGT TTGTTGCATT AACCCGAACG CGATTTCGAT GATTTATGCG
ATCAGCGGCC CGCTCATTGC CATGATACTT TTCATCATGC CTACGTTGTC AACGTATCTG
ATCCCGGCGC TTAAACCCTG GCGCTCCATC GGAAATCTGA TTACGCTGAT CGTGGGTATC
CTGTGCGTAT CGGTAATGTT CTTTAGCTAA
 
Protein sequence
MSNIWSKEET LWSFALYGTA VGAGTLFLPI QLGSAGAVVL FITALVAWPL TYWPHKALCQ 
FILSSKTSAG EGITGAVTHY YGKKIGNLIT TLYFIAFFVV VLIYAVAITN SLTEQLAKHM
VIDLRIRMLV SLGVVLILNL IFLMGRHATI RVMGFLVFPL IAYFLFLSIY LVGSWQPDLL
TTQVEFNQNP LHQIWISIPV MVFAFSHTPI ISTFAIDRRE KYGEHAMDKC KKIMKVAYLI
ICISVLFFVF SCLLSIPPSY IEAAKEEGVT ILSALSMLPN APAWLSISGI IVAVVAMSKS
FLGTYFGVIE GATEVVKTTL QQVGVKKSRA FNRALSIMLV SLITFIVCCI NPNAISMIYA
ISGPLIAMIL FIMPTLSTYL IPALKPWRSI GNLITLIVGI LCVSVMFFS