Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3015 |
Symbol | |
ID | 6270486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2810318 |
End bp | 2811547 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641726948 |
Product | serine transporter family protein |
Protein accession | YP_001881413 |
Protein GI | 187730121 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAATA TTTGGTCTAA AGAAGAAACT CTGTGGAGTT TCGCGCTCTA CGGCACAGCC GTTGGTGCAG GCACGCTCTT CCTTCCTATT CAGTTAGGTT CGGCAGGGGC TGTGGTCCTG TTTATTACTG CTCTGGTCGC CTGGCCTTTA ACATATTGGC CACATAAAGC TTTATGCCAG TTCATCCTCT CATCGAAAAC ATCAGCAGGT GAAGGGATAA CGGGCGCGGT AACACACTAC TATGGCAAGA AGATTGGTAA TCTGATTACC ACGCTGTACT TCATCGCCTT TTTTGTCGTC GTGTTGATAT ATGCAGTGGC AATTACCAAC TCACTTACAG AACAGCTGGC AAAGCATATG GTTATTGATC TTCGCATCCG TATGTTGGTG AGTCTGGGTG TTGTATTAAT CCTGAATCTC ATTTTTCTGA TGGGACGCCA TGCAACCATT CGGGTAATGG GTTTTTTGGT ATTCCCATTG ATTGCCTATT TCTTATTTCT TTCCATTTAC CTTGTCGGTA GTTGGCAACC TGATCTATTA ACGACCCAGG TAGAGTTCAA TCAGAATCCC CTTCACCAGA TATGGATATC GATTCCCGTG ATGGTTTTCG CCTTTAGCCA TACGCCCATT ATTTCTACGT TTGCCATAGA CAGACGTGAA AAATATGGCG AACACGCTAT GGATAAATGC AAAAAAATTA TGAAAGTCGC TTATCTCATC ATCTGCATAA GTGTACTGTT CTTTGTCTTT AGCTGCCTGC TTTCTATTCC ACCTTCGTAT ATTGAAGCGG CTAAAGAAGA AGGGGTCACC ATTTTATCGG CGCTTTCTAT GCTGCCGAAC GCCCCAGCAT GGTTGTCAAT TTCCGGGATT ATTGTCGCAG TAGTTGCGAT GTCGAAATCA TTCCTGGGTA CGTACTTTGG CGTTATTGAA GGTGCCACGG AGGTCGTCAA AACAACACTA CAGCAGGTTG GTGTAAAGAA AAGTCGTGCA TTTAACCGCG CACTATCAAT TATGTTGGTA TCGCTGATTA CCTTCATTGT TTGTTGCATT AACCCGAACG CGATTTCGAT GATTTATGCG ATCAGCGGCC CGCTCATTGC CATGATACTT TTCATCATGC CTACGTTGTC AACGTATCTG ATCCCGGCGC TTAAACCCTG GCGCTCCATC GGAAATCTGA TTACGCTGAT CGTGGGTATC CTGTGCGTAT CGGTAATGTT CTTTAGCTAA
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Protein sequence | MSNIWSKEET LWSFALYGTA VGAGTLFLPI QLGSAGAVVL FITALVAWPL TYWPHKALCQ FILSSKTSAG EGITGAVTHY YGKKIGNLIT TLYFIAFFVV VLIYAVAITN SLTEQLAKHM VIDLRIRMLV SLGVVLILNL IFLMGRHATI RVMGFLVFPL IAYFLFLSIY LVGSWQPDLL TTQVEFNQNP LHQIWISIPV MVFAFSHTPI ISTFAIDRRE KYGEHAMDKC KKIMKVAYLI ICISVLFFVF SCLLSIPPSY IEAAKEEGVT ILSALSMLPN APAWLSISGI IVAVVAMSKS FLGTYFGVIE GATEVVKTTL QQVGVKKSRA FNRALSIMLV SLITFIVCCI NPNAISMIYA ISGPLIAMIL FIMPTLSTYL IPALKPWRSI GNLITLIVGI LCVSVMFFS
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