| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2923 |
|---|
| Symbol | tadA |
|---|
| ID | 6272068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 2732468 |
|---|
| End bp | 2733004 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641726869 |
|---|
| Product | tRNA-specific adenosine deaminase |
|---|
| Protein accession | YP_001881338 |
|---|
| Protein GI | 187730453 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGCG CTTTTATAAC CGGAGTTTTC TTTTTGTCTG AAGTCGAATT TAGCCACGAA
TACTGGATGC GTCACGCGCT GACGCTGGCG AAACGTGCCT GGGATGAGCG GGAAGTGCCG
GTCGGCGCGG TATTAGTGCA TAACAATCGG GTAATCGGCG AAGGCTGGAA CCGCCCGATT
GGTCGCCATG ATCCCACCGC ACATGCAGAA ATCATGGCCC TGCGGCAGGG TGGTCTGGTG
ATGCAAAATT ATCGTCTGAT CGACGCCACG TTGTATGTCA CGCTTGAACC ATGTGTAATG
TGTGCCGGAG CGATGATCCA CAGTCGCATT GGTCGCGTGG TCTTTGGTGC GCGTGACGCG
AAAACTGGCG CTGCGGGATC TTTAATGGAT GTGCTGCATC ATCCGGGTAT GAATCACCGA
GTGGAAATTA CGGAAGGAAT ACTGGCGGAT GAGTGCGCGG CGTTGCTCAG TGACTTCTTT
CGCATGCGCC GCCAGGAAAT TAAAGCGCAG AAAAAAGCGC AATCCTCGAC GGATTAA
|
|---|
| Protein sequence | MRRAFITGVF FLSEVEFSHE YWMRHALTLA KRAWDEREVP VGAVLVHNNR VIGEGWNRPI
GRHDPTAHAE IMALRQGGLV MQNYRLIDAT LYVTLEPCVM CAGAMIHSRI GRVVFGARDA
KTGAAGSLMD VLHHPGMNHR VEITEGILAD ECAALLSDFF RMRRQEIKAQ KKAQSSTD
|
|---|
| |