| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2876 |
|---|
| Symbol | ppx |
|---|
| ID | 6271040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 2674839 |
|---|
| End bp | 2676380 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641726820 |
|---|
| Product | exopolyphosphatase |
|---|
| Protein accession | YP_001881293 |
|---|
| Protein GI | 187731393 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0248] Exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATAC ACGATAAATC CCCTCGTCCG CAGGAGTTTG CTGCGGTCGA TCTTGGTTCA
AACAGTTTTC ACATGGTCAT AGCCCGTGTG GTAGATGGTG CCATGCAGAT TATTGGCCGC
CTGAAACAGC GAGTGCATCT GGCGGACGGC CTGGGGCCAG ATAATATGTT GAGTGAAGAG
GCAATGACGC GCGGTTTGAA CTGTCTGTCG CTGTTTGCCG AACGGCTACA AGGGTTTTCT
CCTGCCAGCG TCTGTATAGT CGGCACCCAT ACGCTGCGTC AGGCGCTGAA CGCCACTGAC
TTTCTGAAAC GCGTGGAAAA GGTCATTCCC TACCCGATTG AAATTATTTC CGGTAATGAA
GAAGCCCGTC TGATTTTTAT GGGCGTGGAA CATACCCAAC CGGAGAAAGG TCGCAAACTG
GTTATTGATA TTGGCGGCGG ATCTACGGAA CTGGTGATTG GTGAAAATTT CGAACCGATT
CTCGTTGAAA GCCGCCGGAT GGGTTGTGTC AGCTTTGCCC AGCTTTACTT CCCTGGCGGG
GTCATCAATA AAGAGAATTT TCAGCGCGCT CGTATGGCGG CAGCACAAAA ACTGGAAACT
TTAACCTGGC AATTCCGTAT TCAGGGCTGG AACGTGGCAA TGGGCGCTTC CGGTACCATA
AAAGCCGCCC ATGAAGTGTT AATGGAAATG GGCGAGAAAG ACGGAATAAT TACCCCGGAA
CGTCTGGAAA AACTGGTAAA AGAAGTTTTA CGTCACCGTA ATTTCGCATC GCTGAGTTTA
CCGGGTCTTT CCGAAGAGCG GAAAACAGTC TTCGTTCCTG GACTGGCGAT TTTATGCGGT
GTGTTTGATG CTTTAGCCAT CCGTGAACTG CGCCTTTCTG ACGGGGCGTT ACGCGAAGGC
GTACTGTACG AAATGGAAGG ACGTTTCCGT CATCAGGATG TGCGTAGTCG CACCGCCAGC
AGCCTCGCCA ACCAGTATCA CATCGACAGC GAACAGGCCC GACGGGTGCT GGATACCACT
ATGCAAATGT ACGAACAGTG GCGGGAACAG CAACCGAAGC TGGCGCATCC GCAACTGGAG
GCGCTACTGC GATGGGCCGC CATGCTGCAT GAGGTCGGGT TGAATATCAA CCACAGCGGT
TTGCATCGCC ACTCCGCTTA TATTCTGCAA AACAGTGACT TGCCGGGTTT TAATCAGGAA
CAGCAGCTGA TGATGGCGAC ACTGGTGCGC TATCACCGCA AAGCGATTAA ACTCGACGAT
CTGCCGCGCT TTACCTTGTT TAAGAAGAAA CAGTTCCTGC CACTGATTCA GCTATTGCGC
CTTGGCGTAT TACTCAACAA TCAACGTCAG GCAACCACCA CACCGCCAAC ATTGACACTG
ATTACTGATG ACAGTCACTG GACACTGCGT TTCCCGCATG ACTGGTTTAG TCAGAATGCG
TTGGTACTGC TTGATCTGGA AAAGGAGCAA GAATACTGGG AAGGCGTGGC TGGCTGGCGG
TTGAAAATTG AAGAAGAAAG TACACCTGAA ATCGCCGCTT AA
|
|---|
| Protein sequence | MPIHDKSPRP QEFAAVDLGS NSFHMVIARV VDGAMQIIGR LKQRVHLADG LGPDNMLSEE
AMTRGLNCLS LFAERLQGFS PASVCIVGTH TLRQALNATD FLKRVEKVIP YPIEIISGNE
EARLIFMGVE HTQPEKGRKL VIDIGGGSTE LVIGENFEPI LVESRRMGCV SFAQLYFPGG
VINKENFQRA RMAAAQKLET LTWQFRIQGW NVAMGASGTI KAAHEVLMEM GEKDGIITPE
RLEKLVKEVL RHRNFASLSL PGLSEERKTV FVPGLAILCG VFDALAIREL RLSDGALREG
VLYEMEGRFR HQDVRSRTAS SLANQYHIDS EQARRVLDTT MQMYEQWREQ QPKLAHPQLE
ALLRWAAMLH EVGLNINHSG LHRHSAYILQ NSDLPGFNQE QQLMMATLVR YHRKAIKLDD
LPRFTLFKKK QFLPLIQLLR LGVLLNNQRQ ATTTPPTLTL ITDDSHWTLR FPHDWFSQNA
LVLLDLEKEQ EYWEGVAGWR LKIEEESTPE IAA
|
|---|
| |