Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2859 |
Symbol | |
ID | 6270365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2656720 |
End bp | 2658435 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641726804 |
Product | hydrogenase-4, G subunit |
Protein accession | YP_001881277 |
Protein GI | 187733753 |
COG category | [C] Energy production and conversion |
COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit [COG3261] Ni,Fe-hydrogenase III large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACGTTA ATTCATCGTC AAATCGTGGC GAAGCGATTC TCGCCGCCCT GAAAACGCAG TTCCCCGGCG CGGTGCTGGA TGAAGAGCGA CAAACGCCTG AACAGGTCAC CATTACGGTG AAAATCAATC TGCTGCCTGA CGTTGTACAT TATCTTTATT ATCAACATGA TGGCTGGCTT CCAGTCCTGT TTGGCAACGA CGAGCGGACA CTTAACGGTC ATTACGCGGT TTATTATGCC CTTTCAATGG AAGGGGCCGA AAAATGCTGG ATCGTGGTGA AGGCACTGGT CGATGCCGAC AGTCGGGAGT TTCCGTCAGT CACACCGCGC GTCCCTGCCG CGGTCTGGGG CGAGCGAGAA ATTCGCGATA TGTACGGGCT GATTCCGGTT GGCCTGCCGG ATCAGCGTCG CCTGGTGTTG CCCGATGACT GGCCGGAAGA TATGCATCCG CTGCGCAAAG ATGCGATGGA TTATCGACTG CGCCCTGAAC CGACGACAGA TTCCGAAACG TATGCGTTTA TCAATGAGGG CAACAGCGAT GCGCGGGTGA TCCCTGTCGG CCCGCTGCAT ATCACCTCCG ATGAACCGGG TCACTTCCGC TTGTTTGTGG ATGGCGAGCA AATTGTCGAT GCTGATTACC GCCTGTTTTA TGTCCATCGC GGCATGGAGA AACTGGCAGA AACGCGGATG GGCTACAACG AAGTGACCTT CTTATCGGAC CGCGTGTGTG GGATTTGCGG TTTTGCCCAC AGTGTGGCCT ATACCAACTC GGTTGAAAAT GCACTGGGGA TTGAGGTGCC GCAACGAGCG CATACCATTC GCTCGATTCT GCTGGAAGTC GAACGGCTAC ACAGTCATTT GCTCAACCTT GGCCTCTCCT GCCATTTTGT TGGTTTTGAT ACCGGCTTTA TGCAATTTTT CCGCGTGCGG GAAAAGTCGA TGACGATGGC GGAATTGCTG ACCGGGTCGC GTAAAACCTA CGGTCTGAAT CTGATTGGTG GTGTTCGCCG CGATATTCTC AAAGAGCAAC GTCTGCAAAC GCTGAAACTG GTGCGCGAGA TGCGCGCCGA CGTGTCGGAG CTGGTAGAGA TGCTGCTTGC TACGCCGAAT ATGGAACAAC GCACTCAGGA CATTGGCATT CTCGACCGAC AAATCGCCCG TGATTATAGC CCTGTAGGGC CGCTGATCCG CGGCAGTGGT TTTGCCCGTG ATTTGCGCTT TGATCACCCC TACGCCGACT ACGGCAATAT TCCAAAAACA CTGTTTACCT TCACCGGCGG CGATGTTTTC TCCCGCGTGA TGGTCCGTGT CAAAGAGACG TTTGATTCGC TGGCAATGCT GGAATTTGCC CTCGACAACA TGCTGGATAC CCCACTGCTG ACCGAAGGCT TTAGCTATAA ACCTCACGCA TTCGCGCTGG GCTTTGTTGA AGCGCCACGC GGTGAAGACG TGCACTGGAG CATGCTCGGT GATAACCAAA AATTGTTCCG CTGGCGCTGC CGTGCCGCCA CCTACGCCAA CTGGCCGGTG TTGCGTTACA TGCTGCGCGG CAATACCGTT TCTGACGCAC CGCTGATTAT CGGTAGCCTT GATCCCTGCT ACTCCTGTAC CGACCGTGTG ACGCTGGTAG ATGTGCGCAA GCGCCAGTCA AAAACCGTGC CGTATAAAGA GATCGAACGC TACGGCATTG ATCGTAACCG TTCGCCGCTG AAGTAA
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Protein sequence | MNVNSSSNRG EAILAALKTQ FPGAVLDEER QTPEQVTITV KINLLPDVVH YLYYQHDGWL PVLFGNDERT LNGHYAVYYA LSMEGAEKCW IVVKALVDAD SREFPSVTPR VPAAVWGERE IRDMYGLIPV GLPDQRRLVL PDDWPEDMHP LRKDAMDYRL RPEPTTDSET YAFINEGNSD ARVIPVGPLH ITSDEPGHFR LFVDGEQIVD ADYRLFYVHR GMEKLAETRM GYNEVTFLSD RVCGICGFAH SVAYTNSVEN ALGIEVPQRA HTIRSILLEV ERLHSHLLNL GLSCHFVGFD TGFMQFFRVR EKSMTMAELL TGSRKTYGLN LIGGVRRDIL KEQRLQTLKL VREMRADVSE LVEMLLATPN MEQRTQDIGI LDRQIARDYS PVGPLIRGSG FARDLRFDHP YADYGNIPKT LFTFTGGDVF SRVMVRVKET FDSLAMLEFA LDNMLDTPLL TEGFSYKPHA FALGFVEAPR GEDVHWSMLG DNQKLFRWRC RAATYANWPV LRYMLRGNTV SDAPLIIGSL DPCYSCTDRV TLVDVRKRQS KTVPYKEIER YGIDRNRSPL K
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