Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2850 |
Symbol | dapA |
ID | 6272954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2647355 |
End bp | 2648233 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641726797 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001881270 |
Protein GI | 187732196 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCACGG GAAGTATTGT CGCGATTGTT ACTCCGATGG ATGAAAAAGG TAATGTCTGT CGGGCTAGCT TGAAAAAACT GATTGATTAT CATGTCGCCA GCGGTACTTC GGCGATCGTT TCTGTTGGCA CCACTGGCGA GTCCGCTACC TTAAATCATG ACGAACATGC TGATGTGGTG ATGATGACGC TGGAGCTGGC TGACGGGCGC ATTCCGGTGA TTGCCGGGAC CGGTGCTAAC GCTACTGCGG AAGCCATTAG CCTGACGCAG CGCTTCAATG ACAGCGGTAT CGTCGGCTGC CTGACGGTAA CCCCTTACTA CAATCGTCCG TCGCAAGAAG GTTTGTATCA GCATTTCAAA GCCATCGCTG AACATACTGA CCTGCCGCAA ATTCTGTATA ATGTGCCGTC CCGTACTGGC TGCGATCTGC TCCCGGAAAC GGTGGGCCGT CTGGCGAAAG TAAAAAATAT TATCGGAATC AAAGAGGCAA CAGGGAACTT AACGCGTGTA AACCAGATCA AAGAGCTGGT TTCAGATGAT TTTGTTCTGC TGAGCGGCGA TGATGCGAGC GCGCTGGACT TCATGCAATT AGGCGGTCAT GGGGTTATTT CCGTTACGGC TAACGTCGCA GCGCGTGATA TGGCCCAGAT GTGCAAACTG GCAGCAGAAG GGCATTTTGC CGAGGCACGC GTTATTAATC AGCGTCTGAT GCCATTACAC AACAAACTAT TTGTCGAACC CAATCCAATC CCGGTGAAAT GGGCATGTAA GGAACTGGGT CTTGTGGCGA CCGATACGCT GCGCCTGCCA ATGACACCAA TCACCGACAG TGGTCGTGAG ACGGTCAGAG CGGCGCTTAA GCATGCCGGT TTGCTGTAA
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Protein sequence | MFTGSIVAIV TPMDEKGNVC RASLKKLIDY HVASGTSAIV SVGTTGESAT LNHDEHADVV MMTLELADGR IPVIAGTGAN ATAEAISLTQ RFNDSGIVGC LTVTPYYNRP SQEGLYQHFK AIAEHTDLPQ ILYNVPSRTG CDLLPETVGR LAKVKNIIGI KEATGNLTRV NQIKELVSDD FVLLSGDDAS ALDFMQLGGH GVISVTANVA ARDMAQMCKL AAEGHFAEAR VINQRLMPLH NKLFVEPNPI PVKWACKELG LVATDTLRLP MTPITDSGRE TVRAALKHAG LL
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