Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2798 |
Symbol | ucpA |
ID | 6272355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2596060 |
End bp | 2596851 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641726752 |
Product | short chain dehydrogenase |
Protein accession | YP_001881225 |
Protein GI | 187731870 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAAAC TCACGGGCAA GACAGCACTG ATTACGGGCG CATTGCAGGG AATTGGCGAA GGAATTGCCA GAACTTTTGC ACGTCATGGC GCGAACCTAA TCTTGCTGGA TATCTCCCCT GAGATCGAAA AGCTGGCGGA CGAACTGTGT GGTCGTGGTC ATCGCTGTAC GGCGGTTGTC GCCGATGTGC GTGACCCGGC GTCGGTAGCC GCAGCTATCA AACGCGCGAA GGAAAAAGAA GGGCGCATTG ATATCCTGGT GAATAACGCA GGCGTTTGTC GTCTGGGCAG TTTCCTCGAT ATGAGCGATG ACGATCGCGA TTTCCATATT GATATCAATA TTAAAGGCGT ATGGAACGTC ACGAAGGCGG TGCTGCCGGA GATGATTGCG CGCAAAGATG GTCGCATTGT GATGATGTCT TCAGTCACTG GTGATATGGT GGCCGATCCT GGCGAAACGG CGTACGCCTT AACGAAAGCG GCGATTGTTG GCCTGACAAA ATCGCTGGCG GTGGAGTACG CGCAGTCTGG TATTCGCGTT AACGCCATTT GCCCGGGATA CGTGCGCACA CCAATGGCGG AAAGCATTGC CCGCCAGTCG AACCCGGAAG ATCCAGAGTC GGTGCTGACT GAAATGGCGA AAGCAATCCC GATGCGTCGC CTCGCCGATC CGCTGGAAGT CGGCGAACTG GCGGCCTTCC TCGCATCGGA TGAATCCAGC TATTTAACTG GTACACAGAA TGTGATTGAT GGCGGCAGCA CACTGCCGGA GACGGTTAGC GTCGGTATCT GA
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Protein sequence | MGKLTGKTAL ITGALQGIGE GIARTFARHG ANLILLDISP EIEKLADELC GRGHRCTAVV ADVRDPASVA AAIKRAKEKE GRIDILVNNA GVCRLGSFLD MSDDDRDFHI DINIKGVWNV TKAVLPEMIA RKDGRIVMMS SVTGDMVADP GETAYALTKA AIVGLTKSLA VEYAQSGIRV NAICPGYVRT PMAESIARQS NPEDPESVLT EMAKAIPMRR LADPLEVGEL AAFLASDESS YLTGTQNVID GGSTLPETVS VGI
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